Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00110 ATGGAAGAGGAAATCAAGTCCGAATTCAAACGAAGCCAGTTCGACCTCGAAGACGAAGAAGAAATTCTCAGAAAATGTGTCACTTTTTGCATCAACTACGGTCTCGCACCTTCCGATCTGGTCTCATGCTGGGAAGCTTATTACCTCAATGGAATGCTGGACGGATCAATAGTACAAAATGCTGAAATTGATGGCTTTCTGTTGCATCTACAAAATCAGAAGAAAGAGGATGTTGTAAAGGAAAAGGAGGAAGCTGGCTTGCATATGTACTCCATCGCGGATGTAGAAATGATCTTAAATAATGATGATGATACAATGGACAATACTCCCGGAACTCCAATAAATCACCATCAAGATCTTTTTTCTCCTGCACCTGATTCAACATCTTTAATGTACGAGAATGTTTTATCTTCTGGAAAACCATCAAAATCAAAACTAGAAACACCCTTCTCAAAGCGAACAGATAGATTTTTGGTGAAATTTAATATGAACACTGTCCCTGACATTGAGAATGGAAAACAAGAACCTAATCATGAGATTGATGAGGATGATGTTGTTAGAAGAGTTCCAAGCCGTAAAAGGTGTTCATTGGTCATTCACGGATCAGGATCCAAACCAAATTGCAGATTCATGTATGATAGACTAGAGGATAGGCTTAATGCTATAGAAAACCGAATTAGGAAACATACAAGGGCATTTGTAGCTTCTGGGATCCATGAAGAACCAACAGACCCAACAACTGCTTCACAGAGAAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTTTAAACGAGAAGTCTGTCATGCTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTTCGCCTAGAATTGCACCGTCTAAGCCATTATTCAATTTTTCCTGGCCAGGTAGTTTGTATTGAAGGGCATAATCCTAGTGGGCATTGCTTCATTGCATCTAATCTGGTAGATTCTATACCCACCTCTATTGCTGATGAGAATTTGAATCCTGCAAAGAAGCAAGCTATTGATAAAGAGAATCAACCAACTGATCTGCTATCTAAAGAGAGAGAATTATCAATGATTATCGCAGCTGGACCCTTTACTACAACGGACAATTTGTTGTTTGAGCCTCTTATGGAATTGCTGGCATATGCAAAACGAAGACCACCACAGTTACTTGTATTGCTGGGACCATTTGTTGACTCTGAACACCCAGAAGTTAAGAAAGGAACTGTAGACAAGAGTTTTGATGAGATATTTCATTTTGAAATCCTGAGGAAGTTGGAAGATTATGTAGAATGTATGGGTTCAGCACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAGCCATGATTTTGTTTTTCCTCAGCCTGCATTCGACATCAATCTACCTGATCTCAAATCTCAGATAGCCTGCCTTGGTAATCCTGGAGTCTTTGAGGCAAATGAGGTTAAGGTTGGTTGCTGCACTGTGGATATTCTCAAGCAAATCAGTGGGGAGGAGATATCACGAACTGCAGCAGATGGAAAGCCCATTGATCGCATGAGTAGACTTGCAAATCATATTCTTAACCAACAAAGCTTCTATCCACTTTACCCACCAGCAGAAATTCCCTTGGATTTTTCGCTTGCTCCAGAGGCCCTTCAACTGTCCTTGGTTCCAGACATACTAATCCTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGTAGCGAAAGTGAAGGGATAAACCACAACAAATGCATAGCTGTCAATCCGGGAAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTCGAGCTTGATTATTATGGGGGTTCCGACCAAATTAACGCTTCAATTGTTGGCATATAA 1860 0.4113 MEEEIKSEFKRSQFDLEDEEEILRKCVTFCINYGLAPSDLVSCWEAYYLNGMLDGSIVQNAEIDGFLLHLQNQKKEDVVKEKEEAGLHMYSIADVEMILNNDDDTMDNTPGTPINHHQDLFSPAPDSTSLMYENVLSSGKPSKSKLETPFSKRTDRFLVKFNMNTVPDIENGKQEPNHEIDEDDVVRRVPSRKRCSLVIHGSGSKPNCRFMYDRLEDRLNAIENRIRKHTRAFVASGIHEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLELHRLSHYSIFPGQVVCIEGHNPSGHCFIASNLVDSIPTSIADENLNPAKKQAIDKENQPTDLLSKERELSMIIAAGPFTTTDNLLFEPLMELLAYAKRRPPQLLVLLGPFVDSEHPEVKKGTVDKSFDEIFHFEILRKLEDYVECMGSARVLLVPSIRDASHDFVFPQPAFDINLPDLKSQIACLGNPGVFEANEVKVGCCTVDILKQISGEEISRTAADGKPIDRMSRLANHILNQQSFYPLYPPAEIPLDFSLAPEALQLSLVPDILILPSDIKYFVKVLSSESEGINHNKCIAVNPGRLAKGEGGGTFVELDYYGGSDQINASIVGI 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00110 619 Gene3D - 1 65 IPR043034 -
Cca01g00110 619 PIRSF DNA_pol_alpha_2 1 609 IPR016722 -
Cca01g00110 619 Coils Coil 212 232 - -
Cca01g00110 619 Pfam DNA polymerase alpha/epsilon subunit B 361 569 IPR007185 GO:0003677|GO:0006260
Cca01g00110 619 Gene3D - 510 615 - -
Cca01g00110 619 Gene3D - 340 506 - -
Cca01g00110 619 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 617 IPR016722 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00110 2 619 Core DNA Replication Machinery Family AT1G67630 59.069 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00110 K02321 - gmx:100795306 1016.91