Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00088 ATGTTGTATAACCCACGACTACCATCTTCAATCTTATTCTCCCTCCACAACTTTGTTTTGTTTTCTATAATTCTATGTGCTCTTTTTTCATTGAATTCTCCCGAATATAAATCTTCCGTACCACGACATAATCTCTCGTTCCTAATCATGATTCCAACACTTGTTTGTCTTGTCACAACATTATTCAAAAGCAATTTCTCTTGGTCTCTCATCACTCTATTCCTCTCCACTTCACTAGCCCTTCTTGCTATCTCCCTTAACTACTGGCTTGTCCCCGGAGGTTTCGCATGGAGGAAATATCACAACCGTTACAAACACCATGCAAAACTCCCCGGCCCAATCGGGTGGCCCATATTAGGAACTCTTCCTGAAATGGGTCCTTTGGCCCATAGAAAACTGGCTAACATGGCCACCTCACTAAACGCAAAAAGGCTCATGGCGCTAAGTTTGGGTACAAACCCGGTTGTTATCAGCAGTCACCCAGAGACCGCAAGAGAAATTCTCTGTGGGCCGGGGTTTTCGGACCGGCCCATTAAAGAATCGGCCCGAATGCTAATGTTCGAGCGTGCCATTGGATTTGCTCCATATGGGACCTATTGGCGCCACCTTCGTAGGGTGGCCACCACACACATGTTCTCTCCGAGGAGAATTTCCGACATGGAGCATCTCCGACAACATGTGATTGACGAAATGGTTACGAGGACGTGGAAGGAGATGGAGAACAAAGGGGTGGTGGAGGTTCGAAGCATTTTGCACGAAGGGTCTTTGAGCAACATGTTGGAAAGTGTGTTTGGTGTTAATAACTCTCTTAGCTCAAAAACAAAGGAGGTGTTGGGTGACATGATTAAGGAAGGGTATGACTTGATTGCTAAGTTTAACTGGGAAGATTATTTTCCCTTCAGGTTTTTGGACTTTCATGGAGTCAATAGAAGGTGTCACAAATTGGCAAGTAAGGTCAATAGTGTGGTGGGTCAAATTATAGAAGAGAGAAAAAAGTATGGAGAGTTCGTTGGACAAAATGATTTTCTTAGCACTTTGTTGTTTATGCCTGAAGATGAACAGATTGGTGAATCAGATGTAGTGGCTATCTTGTGGGAAATGATATTTAGGGGAACGGATACTGTTTCTATACTTTTGGAATGGATTATGGCCATGATGGTGTTACACCAAGACGTGCAGAAGAAAGCCCGCGAAGAGATCGACACGTGCATAAACCAAAACGGTCACGTGCGAGACTCGGACATTCCGAACCTGCCTTACCTCCAAGCCATAGTGAAGGAGGTTCTCCGGTTGCACCCGCCAGGCCCATTGCTTTCATGGGCCCGTCTCGCAATCCATGACGTCCATGTGGACAAGGTTGTCATTCCAGCTGGCACAACCGCAATGGTTAACATGTGGGCCATATCACACGACGCATCTATTTGGGAGGATCCATGGGCCTTCAAGCCCGAACGGTTTTTAAAAGATGATATATCAATCATGGGCTCGGACATGAGACTGGCACCGTTCGGTGCCGGACGTAGGGTGTGCCCAGGAAAAACGTTGGGCTTAGCTACTGTTCATCTTTGCCTTGCACAGCTTCTTCGCCATTTTATATGGGCTCCGGTGCAGCCCGTGGATCTTTCAGAATGTCTCAAACTTTCCCTAGAAATGAAAAAGCCTTTACGATGCCAAGTGATTCGCAGGTACAACACCAAAAGCTCTTGA 1707 0.461 MLYNPRLPSSILFSLHNFVLFSIILCALFSLNSPEYKSSVPRHNLSFLIMIPTLVCLVTTLFKSNFSWSLITLFLSTSLALLAISLNYWLVPGGFAWRKYHNRYKHHAKLPGPIGWPILGTLPEMGPLAHRKLANMATSLNAKRLMALSLGTNPVVISSHPETAREILCGPGFSDRPIKESARMLMFERAIGFAPYGTYWRHLRRVATTHMFSPRRISDMEHLRQHVIDEMVTRTWKEMENKGVVEVRSILHEGSLSNMLESVFGVNNSLSSKTKEVLGDMIKEGYDLIAKFNWEDYFPFRFLDFHGVNRRCHKLASKVNSVVGQIIEERKKYGEFVGQNDFLSTLLFMPEDEQIGESDVVAILWEMIFRGTDTVSILLEWIMAMMVLHQDVQKKAREEIDTCINQNGHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVVIPAGTTAMVNMWAISHDASIWEDPWAFKPERFLKDDISIMGSDMRLAPFGAGRRVCPGKTLGLATVHLCLAQLLRHFIWAPVQPVDLSECLKLSLEMKKPLRCQVIRRYNTKSS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00088 568 PANTHER CYTOCHROME P450 78A7-RELATED 54 563 - -
Cca01g00088 568 PRINTS E-class P450 group I signature 139 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS E-class P450 group I signature 359 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS E-class P450 group I signature 379 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS E-class P450 group I signature 422 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS E-class P450 group I signature 464 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS E-class P450 group I signature 500 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS E-class P450 group I signature 510 533 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 SUPERFAMILY Cytochrome P450 111 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 503 512 IPR017972 GO:0005506|GO:0016705
Cca01g00088 568 PRINTS P450 superfamily signature 370 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS P450 superfamily signature 501 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PRINTS P450 superfamily signature 510 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 54 563 - -
Cca01g00088 568 Pfam Cytochrome P450 111 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00088 568 Gene3D Cytochrome P450 97 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00088 Cca-Chr1 907999 910468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00088 67 562 Cytochrome P450 AT1G13710 51.976 2.24e-178 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00088 - - ccaj:109797962 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00088 01 907999 910468 Cca09g01772 09 42300328 42302038 PCT