Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00035 ATGTTGCCTGTTTGCTCAGCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTACACCCAATTCGAAAGGATCTTGAGAGCAGATGTGTGGGGGAAGAAGGTTTGCATCTGGCTTCACAATATGGAACACATTCACTGAGAAATTCATTTACAGTGCAAGCTACAAAGACGGTCTTGGCTAGTTTTTCCTCACCAACTGAATCAGGATATCTTACAAGCACATGGGGTTATTCACCAGTGACAACAGATGGGTATCATTCACTTAGTAATGGGGAAGTCACACACATGGAGAGTTATCATTTATCTTCTGTGGACTTTGCAGAACAGGCACCGACACCACCAGAAACACTATCAAGTACTGATATAATGCCAGAGAAGTTTGCACCAAGTCCTAGTTCAATTAATGTGGACAATGAATCGTTAACCAGTACAAAAGCAAGTGTTGGAGACGTTTTCGCTGGGatcaatgaatcattcaatgcctcaatcaatAAGGGGGAAGATGCTTTACGAAGCTCAGTGGATACAGCCACTTCTTTTGTAGATTCTATTGTTAAAACTGCTAATGAATCTATAGACAACGCTTTTGGTAAGGCATTTTCGGCTGTTGATCAAACAGGGGAATTAGCAAATAAGAAACTTACCAGCTTTTCAAGTGAGCTGGGTGGAGTCACAAATAAAGTACCTGCTGTGGCTATTGATGTGTTGCGCCGCACAATTGTAGTAGTAGAGAGTTCTCTAACAAGTGGGGCTTCCTATGTTATCTACCTATATGGGTCTGCCAAGGAGCTCCTTCCTGCAGGAATTAGGGATACAGTCAATGTATATGAAGACAAAGCAACAGAAATCTTGAGGCCTGTTGGGTCCGCAACGGAAAGGATATACATGGCTGTCTATTCATTGGAGAAGGGTCTCGGCTTGGATCCAAATGACCCAATTATTCCATTTATTGTTTTTGTAGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATACGGAGGTTACTCAGGAGATTTATCCCCTAAATCAGCTTTGGAGCTTTTGGCTGAGGACTCAAATGCTGCACTTATTGATGTCCGCACCGAGGAAATGCGAGAAAAAGATGGCATTCCTGATCTTCGACGGGCTGCTCGGTTTCGTTATGCAAGTATAATTCCACTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTAGAGATCTCGATGACTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAGGGTTATTGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGAGTCAAGAATCCATACGTGGTTCAAGGTGGCTTTCAGTCTTGGACTAATCAAGGTGTCCGCATCAAGGAGCTCAAACCAGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGGCCTTCTCCTTTGCAACTTTTAGGTTATGGTACAGGACTTATTGCAGGGCTGTATGCATTATTAGAGTGGGAGAAGACATTACAGTTAATTGGTACATTTGGCCTCGGTTTGACCATATATTTGCGGGTTTCTTCATATGAAAACTCAGAAGATCTAAGACAAGATGTGAGGTTGTTGCTTGCTCCTATTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCCAATGGCTTAGGATTACCTACATCCCCTTCATCATTAGATGTTCAGAATCGGGTGTTGCAGGCTGCTGCCAAACATGAATCCCAACCATCTGATAGTGAAGGAAACCAAGATCCAGTTACGGAGTCTACTGTTCCTCTCAATCAGAATGCCACATTGCTTGTTTGGTCTTCTATGATCCGTTTGCCACCGGATCTTGCCACCGGATCACCTTGCCATCACGTAGCACGCAGTGGAAAAATAAAGGAAAGACAATAA 1971 0.4272 MLPVCSATSSQIPLFGGLHPIRKDLESRCVGEEGLHLASQYGTHSLRNSFTVQATKTVLASFSSPTESGYLTSTWGYSPVTTDGYHSLSNGEVTHMESYHLSSVDFAEQAPTPPETLSSTDIMPEKFAPSPSSINVDNESLTSTKASVGDVFAGINESFNASINKGEDALRSSVDTATSFVDSIVKTANESIDNAFGKAFSAVDQTGELANKKLTSFSSELGGVTNKVPAVAIDVLRRTIVVVESSLTSGASYVIYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATERIYMAVYSLEKGLGLDPNDPIIPFIVFVGSSATLWAFYWLWTYGGYSGDLSPKSALELLAEDSNAALIDVRTEEMREKDGIPDLRRAARFRYASIIPLEVDGSIRKLLKSGRDLDDSLIAAIIRNLKIVKDSSRVIVLDADGTRSKGIARSLRKIGVKNPYVVQGGFQSWTNQGVRIKELKPETALSILNEEAEAILEDVRPSPLQLLGYGTGLIAGLYALLEWEKTLQLIGTFGLGLTIYLRVSSYENSEDLRQDVRLLLAPIRLGAQAFSWAAGKLESNGLGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPVTESTVPLNQNATLLVWSSMIRLPPDLATGSPCHHVARSGKIKERQ 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00035 656 Gene3D - 338 479 IPR036873 -
Cca01g00035 656 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 623 IPR044690 GO:0009704|GO:0071277|GO:0090333
Cca01g00035 656 Pfam Rhodanese-like domain 344 464 IPR001763 -
Cca01g00035 656 SMART rhod_4 343 468 IPR001763 -
Cca01g00035 656 MobiDBLite consensus disorder prediction 594 615 - -
Cca01g00035 656 CDD RHOD 348 462 - -
Cca01g00035 656 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 623 - -
Cca01g00035 656 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 326 468 IPR036873 -
Cca01g00035 656 ProSiteProfiles Rhodanese domain profile. 353 471 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00035 315 432 Sulfurtransferasese or Rhodanese AT5G23060 29.365 6.23e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00035 - - gmx:100786142 1075.46