Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01861 ATGGATATTATAACCGAAGAAGTGATATGGAAAGAAATCGAGGTTTCAGAGAGCTACCTTGTTTGCTCCATGTATGAACAAGCTGCATCACTAGCTTCCTCTATTTTGGAACGCTTGCGCCATGATTACCACGACATTGCAACTCAAGATATGCTTGAATCAATTTCCATGGTCCTCCTTCAGGCGTTCAATCAAATTGGCAGGACTTCAGAAATCTTTGATCAACTCCGACACCATTTCGTTTCACTAAAAGCTATTCCCGCTCAAGTTCTTCTTACTGGAGCATGTTTTCAAATAGAACAAAGTTCTGCTTTGGGTGTTCGAGAATTTCTCGAGGAGTTTCTTGATGGATGGAGTCTTGGGGATGGACAATATGATGCTTTCATTGCAGAAGCAAATGTAGAGCATGGAAGTCGATTGGAAAGGCACTTTATTCTTGGAATTGATGAATATTTGGAAGTTGTTGAGGTATATGCCGTCACACTTCTTGCAACGATTCTAGAAGATGTAGATCTTGCAATTTCCTGGGTTGAGAATGCTCCATTGGCTGAGGAAAATCGACAGGGACTTCTGCGAAGGTTACACTCTATGCATTCTCTTAAAAGTACCAATTTGTCTCAAGTTTCCTCTCTGCAATCACCTACTAATAACAATGCAACTTATTTGTTGAAAGAACCACATGAGCGTGAAGGATCGCCTGAAGCCTTGAAAGGCAAACATGCCGACTATAAAATGTTTAGGTTCAAAGATGGTGTGTCAAAACTTTCTGAACAAATAGACACATGTTTCTGGTGTTTCCGTTCTGTTAATTTGAAGTTTGGTAATGCTAAATTCGTCGTATCTAGTGGGAAGATTATGCTAGGTTGTTTGATCCTGTTCATCTGTTATGTTTTCAGAAGAAAGCAGGCTACTTTGAAAAGGATTGTAAGAAGACAATTGATTGCAGCAAAGAGGGCTTTGGTCGATTTGTGGCAGCTTGCATTTTCATATCAAGTTAATCCTTTGGCGGCTGTTGAACCACTCTCTGCTGCAACACGTCAAGACATAGATTCCCTCCTCAAATTAAAAAACTCTTTCCAAATCACCAACGAAGCATTTTCTTCATGGAACACATCCCTCCCTCCATGTAATGCTGATAATTCAAATTGGTCAGGTGTTCTCTGTTACAAAGGACATGTTTGGGGATTCAAACTCGAAAACATGAACCTTAAAGGAACCATTGACGTCGATTCCATTAAACATTTACCTTATATCAGAACCATTAGTTTCATGAACAACAATTTTGATACAACATGGCCAGAATTAAACAAACTTCCTGGTCTTAAAACGGTTTACTTATCCAATAATAAATTCTCCGGCGAGGTTCCGGCCGAAGCGTTTCAAGGGATGCAATGGTTGAAGAAAATATATCTGTCCAATAATCAGTTGAGTGGTCCTATTCCAACTTCTCTTGCTTCTTTGCCAAGGCTGATTTCTTTGAGGTTGGATGGTAACAGATTCAGTGGTCCTATTCCTCAATTTCAACAAAAGTTTAAATCATTCAGTGTAGCTAATAATCAATTGGAGGGTCAAATACCTTCTACTCTTAACAATATCCCAGCTTCATCTTTTTCGGGTAATGAAAAGCTATGTGGAGCCCCTTTAGGTGCATGTCCCTCGTCCAAAAAGAAATCATCATCATTAAATACGAGTGGTGTTGTGGCTGTGGTTCTTGCTTGTCTTGCACTGCTTGTGATTGTAGCAGTAATATTATTTCTCCTTATTAAAAGAAGAAAAAAATCTAAACAaggagaattagtaggaggaggaggaggagttggtgttggcagcagcaacagcagggatagtaacattcaaaagaaaggagGATCATCATCGTTAAATAACAATTCAGATGATCAAGGTTCGATAAGATCACGAGAAAGCACCAACCACAGTAATAGAAAAGGAGACAACATGAGGTTGTCCTTTGTGAGAGAAGAAGCATCAGGTCAGTTTGATTTGCAAGATCTGTTGAAAGCCTCTGCTGAGATATTGGGAAGTGGTTGTCATAGTTCATCTTATAAGGCTGTTCTCTTGACTGGCCCCACTGTTGTTGTCAAAAGATTCAAACAGATGAACAATGTTGGTAGGGAAGAGTTTAGAGAACACATGCGTAGACTAGGAAGGTTGAATCATCCAAATATCCTTCCTCTCTTATCTTACTACTACAAAAGAGATGAAAAGCTCTTGATTACTGACTTTGTTCCCAATGGCAGCTTGGCCGTTCGCCTTCACGGATACCAAGGTATAGGAGAGACAAGCCTTGATTGGCCAACAAGGTTGAAGATAGTGAAAGGTGTAGCAAATGGTATTGAATATCTTTACAAAGAGATGCCGATGATGATTGCGCCTCATGGTCATCTTAAGTCCTCAAATGTTCTTCTAAGTGAGTCATTGGAGCCTGTCCTCGCTGACTATGGATTAGTACCTGTGATAAACCAAGATATTGCTCCTGAAATCATTGCTATATACAAATCCCCTGAGTATTTGCAGCAAGGCAGGATCACTAAGAAGACTGATGTGTGGAGTCTTGGAATACTGATTTTGGAAATAGTAACTGGAAAGTTCCCTACTAATTTTGTACAACAGATTAAAGGAAGTGAGTTGAGTTTGGCCAATTGGGTTGATTCTATTGTTCCTGAAGAGTGGAGCAGTGAGGTGTTTGATAAAGACATGGAGTTAGATAGAAACAGTGAAAGGGAGATTGTTAAGCTTTTGAAGATTGCATTGGTTTGTTGTGATATGGATGTGGACAAGAGATTTGATTTGCAAGAAGCTGTAGAAAGAATTCAAGAGGTAAAAGAAAGAGATCATATTAATATTAATAATGAAGATGATTTCTATTCAATTGATCATGCTGGTGAAGAAGCTTAA 2916 0.38 MDIITEEVIWKEIEVSESYLVCSMYEQAASLASSILERLRHDYHDIATQDMLESISMVLLQAFNQIGRTSEIFDQLRHHFVSLKAIPAQVLLTGACFQIEQSSALGVREFLEEFLDGWSLGDGQYDAFIAEANVEHGSRLERHFILGIDEYLEVVEVYAVTLLATILEDVDLAISWVENAPLAEENRQGLLRRLHSMHSLKSTNLSQVSSLQSPTNNNATYLLKEPHEREGSPEALKGKHADYKMFRFKDGVSKLSEQIDTCFWCFRSVNLKFGNAKFVVSSGKIMLGCLILFICYVFRRKQATLKRIVRRQLIAAKRALVDLWQLAFSYQVNPLAAVEPLSAATRQDIDSLLKLKNSFQITNEAFSSWNTSLPPCNADNSNWSGVLCYKGHVWGFKLENMNLKGTIDVDSIKHLPYIRTISFMNNNFDTTWPELNKLPGLKTVYLSNNKFSGEVPAEAFQGMQWLKKIYLSNNQLSGPIPTSLASLPRLISLRLDGNRFSGPIPQFQQKFKSFSVANNQLEGQIPSTLNNIPASSFSGNEKLCGAPLGACPSSKKKSSSLNTSGVVAVVLACLALLVIVAVILFLLIKRRKKSKQGELVGGGGGVGVGSSNSRDSNIQKKGGSSSLNNNSDDQGSIRSRESTNHSNRKGDNMRLSFVREEASGQFDLQDLLKASAEILGSGCHSSSYKAVLLTGPTVVVKRFKQMNNVGREEFREHMRRLGRLNHPNILPLLSYYYKRDEKLLITDFVPNGSLAVRLHGYQGIGETSLDWPTRLKIVKGVANGIEYLYKEMPMMIAPHGHLKSSNVLLSESLEPVLADYGLVPVINQDIAPEIIAIYKSPEYLQQGRITKKTDVWSLGILILEIVTGKFPTNFVQQIKGSELSLANWVDSIVPEEWSSEVFDKDMELDRNSEREIVKLLKIALVCCDMDVDKRFDLQEAVERIQEVKERDHININNEDDFYSIDHAGEEA 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01861 971 ProSiteProfiles Protein kinase domain profile. 673 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01861 971 Gene3D Ribonuclease Inhibitor 512 551 IPR032675 -
Car08g01861 971 Pfam Leucine rich repeat N-terminal domain 347 388 IPR013210 -
Car08g01861 971 CDD TM_EGFR-like 563 596 - -
Car08g01861 971 Gene3D Phosphorylase Kinase; domain 1 637 748 - -
Car08g01861 971 MobiDBLite consensus disorder prediction 609 637 - -
Car08g01861 971 MobiDBLite consensus disorder prediction 638 652 - -
Car08g01861 971 Pfam Leucine rich repeat 439 500 IPR001611 GO:0005515
Car08g01861 971 SUPERFAMILY Protein kinase-like (PK-like) 677 948 IPR011009 -
Car08g01861 971 MobiDBLite consensus disorder prediction 597 652 - -
Car08g01861 971 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 343 957 - -
Car08g01861 971 Gene3D Transferase(Phosphotransferase) domain 1 749 962 - -
Car08g01861 971 Pfam Protein kinase domain 677 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01861 971 PANTHER LRR RECEPTOR-LIKE KINASE 343 957 - -
Car08g01861 971 Gene3D Ribonuclease Inhibitor 345 511 IPR032675 -
Car08g01861 971 SUPERFAMILY L domain-like 345 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01861 Car-Chr8 28536957 28543787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01861 348 963 Receptor kinase-like Gene Family AT5G35390 48.973 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car08g01861 Pkinase 3.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01861 - - ccaj:109803310 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01861 08 28536957 28543787 Car08g01861 08 28536957 28543787 ECH