Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01860 ATGTCTCGGTCGAATATTGGTTCAGAGAAGAAACTGGGTGCAGGACGTGTTGTGGCTGTGGCTATTGAGAATAATAAAACAAGCCAACACGCTGCCAAATGGGCCGTTGAAAATCTTCTTCCCAAAGATCAATGCCTTTATCTTATTCATGTTAAACTAAGAACATCTAATGCTTCCGTACCATCGGGTAACTATGGGGATGGCAACGAAACCGTCATTGATGGCGAATCCAAAGATCTTTTTGATTCATTTCGTGTTTTCTGCAATAGAAAAAATATACAATGCAAAGAAGTGTTGTTGGAAGAGATGGATATATCAAAGGCATTAACAGAATGCATTTCATCTCATGCTATCGAGCTTCTTGTACTTGGGGCATCAACAAGGGGTGGCATTGTTAGAAGATTTAGGACAACAGATGTTCCAACTTCTGTCTCAAAATCTGCACCACCATTCTGCACAGTATATATAATTTCTAAAGGAAAAATCTCAAGTGTAAGATCTGCAACTGCTCCAGTTCCAAAATCAGCAGCACCATCGCCATCGCCATCACCGCCTCATGCTGGTTCTTACCAATTACCACAACAACAACATTCAAATCCATTAATGCCAACTCGTAGTCCTGATAGATTCTCTGACCCGCAAATCACACGTAACTACCCGCCACGACCTACATCAGAGAGGCATGCAGCATATGGTGGTTTCCGGCAGCAGGGGTTGGATGATGAACAAGAAATGATATCACCGTTCAATAGGAGAGGACACAAAGCATATGAGTCATCAATCCCTGATTCAGATATATCATTTGTCAGCAGTGGAAGGCCAAGTATTGATCGAATATTCCCTTCATTGTATAATGTTGATGATCTTGACAATAGTAGTAGTGGAATTCCCAGTAGGCTATCATTTGGCTCTGATTTTGATGCAAAAAGCAGCTTTGCTTCATCCTTTTCTGGTGGAGGTGGACAAAAATCAATTGACTTGTCCTCTCCTTTGGATAATTATTCATTCAGCTCCCAAGGCAGTGCTAACGCCTCTTCTTCATTACGGTTATCTGACGCCTCGGATGAAGTGGAAGCAGAGATGAGGAGGCTGAAGCTTGAACTGAAACAGACAATGGAAATGTACAGTTCAGCTTGCAAGGAAGCTCTCACAGCAAAACAGAAGGCAATTGAACTTCAACGTTGGAAATCagaagaagaaaagaagttagaagaagcaagagaaggtgaaggagcagCAATGGCTATGGTAGAGATGGAACAAGAAAAGTGTAAAGCTGCACTCAAGGCAGCTGAAGCATCTCAGAGAATTGCAGTGCTGGAAGCGCAAAAAAGAATGAATGTCGAAAGAAAAAGCGAAATAGAAGCAAATCAGAGGAAGAAATCAGAAGATTCTTTTCATTCACACGGCACCACTGCAAGGTACAGAAGATACAGCATTGAGGAAATTGAAGACGCGACAAAACGGTTTTCAGACACACTCAAGATTGGTGAAGGAGGGTATGGTCCTGTTTTCAAGTGTGAACTTGATCATACACAGGTTGCTATTAAAGTGTTGAAATCAGATGCTGCTCAAGGAAGGGCACAATTTAACCAGGAAGTTGAAGTGTTGAGTTGTATTAGGCATCCAAACATGGTGCTTCTTTTAGGAGCATGTCCAGAATTTGGTTGCATAGTGTATGAATACATGGCTAATGGAAGTTTGGATGATTGTCTTTTCAGGAGAGGTAAGTCACCACCTCTTCCTTGGCAGTTGAGATTTCAAATTGCTGCTGAGATAGCCACCGGACTCCTTTTCCTTCACCAGGCTAAGCCAGAACCAATCGTACATCGTGACTTAAAGCCTGGAAACATTTTGCTCGACCGAAACTATGTGAGCAAGATAGGTGATGTTGGTTTGGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTGTTACTCAGTACCGCATGACATCAACTGCAGGAACTTTCTGTTACATTGATCCTGAGTACCAGCAAACTGGTATGCTTGGCATCAAATCTGATATTTACTCACTTGGAATCATGCTTTTACAATTGGTAACAGCCAAGCCACCAATGGGTTTGACTCATCATGTTGGAAGATCTATTGAGAAGGGAACTTTTGCTGAGATGCTTGATCCTGCTGTACAAGATTGGCCTATTGAACACGCCTTGCATTTCGCTAAACTTTCTCTTCAGTGTGCTGAAATGAGGAGAAAAGATAGACCCGATCTTGGTAAAGTTGTGTTGCCTGAGCTCAACAAACTCAGAATATTTGCTGATGAAAATATGCCTATGATGATGTATAGAGGTGGTGGTGCAGCATTTAATCCCAGAGGTAGCGGTAACTATTTCATCAATTCCACAGCTTCCTCAAATCAAGACAATATGAGTGAATCCAATTCTTTGTCTGGCACCTCTGGGGGATATGAAAGCCGATCAAGCACGTCATCGCTGGGGAGACTATAA 2469 0.4147 MSRSNIGSEKKLGAGRVVAVAIENNKTSQHAAKWAVENLLPKDQCLYLIHVKLRTSNASVPSGNYGDGNETVIDGESKDLFDSFRVFCNRKNIQCKEVLLEEMDISKALTECISSHAIELLVLGASTRGGIVRRFRTTDVPTSVSKSAPPFCTVYIISKGKISSVRSATAPVPKSAAPSPSPSPPHAGSYQLPQQQHSNPLMPTRSPDRFSDPQITRNYPPRPTSERHAAYGGFRQQGLDDEQEMISPFNRRGHKAYESSIPDSDISFVSSGRPSIDRIFPSLYNVDDLDNSSSGIPSRLSFGSDFDAKSSFASSFSGGGGQKSIDLSSPLDNYSFSSQGSANASSSLRLSDASDEVEAEMRRLKLELKQTMEMYSSACKEALTAKQKAIELQRWKSEEEKKLEEAREGEGAAMAMVEMEQEKCKAALKAAEASQRIAVLEAQKRMNVERKSEIEANQRKKSEDSFHSHGTTARYRRYSIEEIEDATKRFSDTLKIGEGGYGPVFKCELDHTQVAIKVLKSDAAQGRAQFNQEVEVLSCIRHPNMVLLLGACPEFGCIVYEYMANGSLDDCLFRRGKSPPLPWQLRFQIAAEIATGLLFLHQAKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGRSIEKGTFAEMLDPAVQDWPIEHALHFAKLSLQCAEMRRKDRPDLGKVVLPELNKLRIFADENMPMMMYRGGGAAFNPRGSGNYFINSTASSNQDNMSESNSLSGTSGGYESRSSTSSLGRL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01860 822 SUPERFAMILY Protein kinase-like (PK-like) 465 749 IPR011009 -
Car08g01860 822 Pfam Protein kinase domain 493 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01860 822 MobiDBLite consensus disorder prediction 787 822 - -
Car08g01860 822 Coils Coil 354 374 - -
Car08g01860 822 Gene3D Transferase(Phosphotransferase) domain 1 563 764 - -
Car08g01860 822 Gene3D HUPs 15 157 IPR014729 -
Car08g01860 822 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 821 - -
Car08g01860 822 SMART serkin_6 490 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01860 822 Pfam Universal stress protein family 16 149 IPR006016 -
Car08g01860 822 MobiDBLite consensus disorder prediction 188 221 - -
Car08g01860 822 PANTHER OS02G0152300 PROTEIN 7 821 - -
Car08g01860 822 Gene3D Phosphorylase Kinase; domain 1 468 562 - -
Car08g01860 822 CDD STK_N 17 160 - -
Car08g01860 822 MobiDBLite consensus disorder prediction 451 470 - -
Car08g01860 822 MobiDBLite consensus disorder prediction 169 228 - -
Car08g01860 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Car08g01860 822 ProSiteProfiles Protein kinase domain profile. 490 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01860 822 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01860 Car-Chr8 28531964 28535532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01860 18 764 Receptor kinase-like Gene Family AT5G35380 55.808 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car08g01860 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01860 - - cam:101511100 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01860 08 28531964 28535532 Car08g01860 08 28531964 28535532 ECH
Car06g00393 06 4118677 4123361 Car08g01860 08 28531964 28535532 PCT