Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01856 ATGAACAACTTTGTTAAAAAATCCCAAAATCTTTGTACTTTCTTTCCCAACAACTTCAACTTTCATAGATCCTTGTCTCGTTCTCTATCCTTCCAATTAAACTCCTTTTTTATTCAACTCTTTTATTTCATTATCCTTTCTCTGTTTGGTTACTTGGGTCTCAAGTTTTCAAAGCCAAGGACTTGTTTTAGACCCAAAGATTTTGATCTTTTTTACACTTCTGTTTCTGCTTCCACAGTTTCTAGCATGACATCAATAGAAATGGAAGTTTTCTCTAATTTCCAACTCATTCTTCTTACCTTTCTTATGTTAGCAGGTGGAGAAGTTTTTACTTCCATGCTTCAACTTTTTTTAGCTAGATTCAGTTTCACTCAAAATCAGTGTGTCAAAAATGAATATAGTAGCACAACTCTTTCATTGAAACATGATCCATCACACAATCAGATTAATCAAATTGAACTTGGTTTAGTTTCTATTCCTCATCACTCAGAAAACCATACACAGAatcatcataattttaatgataaagataaacttaagtataattCTCTTAGGTACCTAAGTTATGTAGTTTTGGGTTACCTTATGTTGATTCATTTTTTTGGCTTTAGTTTAGTCACCTTTTACTTAACTTATATACCAAGTGCaaaatatgtattgaaaaataaaggtataaagatagaaactttttctttatttctcatagtttcaacatttgcaaGTTGTGGTTATGTACCAACCAATGAGAATTTGATAGTTTTCAAGAAAAATTCAGGtcttcttcttcttattcttcCACATGTACTATTTGGTAATACCCTTTACCCACCATGTTTGAGGCTTTTCTTAAAGGTTATGAAAAGTGTTACTAAAAGAGAGGAATTCTCTTACTTGCTTAAGAATTCAAAGGAAATTGGTTATGATCATTTGCTTTCTGGTATACATTGCTGGTTCCTACTTGTCACTGTCTTTGGTTTCATTGTGATACAATTAGTATTGTTTTGTTCCATGGAGTGGAATTCAAATATTATGGAGGGTTTGAATCCGTATCAAAAACTTGTTGCGTCTTTGTTTCAAGTTACAAATGCTAGACACTCTGGTGAATCTGTTTTTGATCTCTCTGCCATCTCTTCAGCCATATTGGTCATCTTCATTGTCATGATGTATCTCCCACCATACACTACATATTTACCTTTAAGGGACCACGAAATTAATGATGCAAAGAAAGACCAAAAATGCTTAGTGGATTGTCTTGTATTCTCTCAACTCTCTTACTTACTTATTTTCATTATTCTTATTTGCATCACTGAGAGACAAAGCTTAAAAGAGGATCCCCTAAACTTCAACGTGTTCAATATCACCCTTGAAGTCATCAGTGCTTATGGGAACGTAGGGTTCTCAACAGGATATAGTTGTTCAAGGCAATTGAATCACAATTCAATGTGCAAAGATTCATGGATTGGATTTTCTGGTAAGTGGAGTACAAAGGGGAAGTTTATCCTTATCTTGGTTATGTTCTTTGGAAGGCTCAAGAAATTCAATATGAATGGAGGCAAAGCATGGCACCTGTCCTAG 1575 0.3181 MNNFVKKSQNLCTFFPNNFNFHRSLSRSLSFQLNSFFIQLFYFIILSLFGYLGLKFSKPRTCFRPKDFDLFYTSVSASTVSSMTSIEMEVFSNFQLILLTFLMLAGGEVFTSMLQLFLARFSFTQNQCVKNEYSSTTLSLKHDPSHNQINQIELGLVSIPHHSENHTQNHHNFNDKDKLKYNSLRYLSYVVLGYLMLIHFFGFSLVTFYLTYIPSAKYVLKNKGIKIETFSLFLIVSTFASCGYVPTNENLIVFKKNSGLLLLILPHVLFGNTLYPPCLRLFLKVMKSVTKREEFSYLLKNSKEIGYDHLLSGIHCWFLLVTVFGFIVIQLVLFCSMEWNSNIMEGLNPYQKLVASLFQVTNARHSGESVFDLSAISSAILVIFIVMMYLPPYTTYLPLRDHEINDAKKDQKCLVDCLVFSQLSYLLIFIILICITERQSLKEDPLNFNVFNITLEVISAYGNVGFSTGYSCSRQLNHNSMCKDSWIGFSGKWSTKGKFILILVMFFGRLKKFNMNGGKAWHLS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01856 524 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 25 524 - -
Car08g01856 524 PANTHER SODIUM TRANSPORTER HKT1 25 524 - -
Car08g01856 524 Pfam Cation transport protein 422 480 IPR003445 GO:0006812|GO:0008324|GO:0055085
Car08g01856 524 Pfam Cation transport protein 175 390 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01856 Car-Chr8 28503027 28506474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01856 55 523 Inorganic Solute Cotransporters AT4G10310 48.548 1.54e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01856 K24976 - gmx:100779582 706.057