Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01855 ATGTTCATTGGTGGTGAAATCTTTACCTCAATGGTAGGACTTCATTTCATTAGATCAAGATTAAAAAAGGAGTTAGATAAAATCGCTTCTTCGCATGCTCGTCTTGCTTCTTTAAACTCCGTTATTGTTGATCAAATTCATTTTGAAGTTGAATTGGGAATAAATTCTAACTCACACAATAAATCACATGAATCTTTGAGTACCATAAATGAGAAAGAATTCAGGTCTTCTTATTATGCTTATTCCACAAGTGCTTCTTGGGAACACATTGTACCCTCCATGTTTGAGATTTTGCATATGGGTATTGGGAAAATTTTATANNNNNNNNNNNAGTGTGGTTATCTTTTGAAGAATGCAGAGGAAGTTGGTTACAAACACTTGTTACAAGGGAAACACTCTGTTTTTATTGTGCTTAGTGTTTTTGGATTTATTATGGTTCAAGTTACACTTTTTTGTCTATTGGATTGGAATTTAGAAGGTTTGAAGGGGTTGAATTGGTATCAAAAAATGATTGGTGTATTATTTCAAAGTGTTAATTCAAGACACACTGGTGAAACTATTGTGGACCTATCAACTGTATCACAAGCCATCTTGGTATTATTTGTCTTCATGATGTATCTTCCTCCTTACACCTCATTCCTTCCATTAAAAGATGAGGGTGAAAAATCAGAAAGGATGAAAAAGAAAAGAGGAAAAGTTATGGATAATTTGATATTCTCTCAACTCTCCTATTTACTCATATTCATCATACTAGTATGCATAACTGAGAGAAAACATTTGAAGGATGATCCTCTCAATTTCAACGTCTTCAATATTGTTTTTGAAGTTGTCAGTGCGTATGGGAACGTAGGATTTAGTACAGGATATAGTTGTGAACGACAATTACATCGAGATGCAAATTGTGAAAACAAGTGGATTGGATTTGTTGGAAAATGGAGTGATGAAGGTAAGATCATTCTCATAATTGTTATGTTCTTTGGAAGACTCaagaaattcaatatggatggaggcaagccatggaaactcctctaa 1032 0.3178 MFIGGEIFTSMVGLHFIRSRLKKELDKIASSHARLASLNSVIVDQIHFEVELGINSNSHNKSHESLSTINEKEFRSSYYAYSTSASWEHIVPSMFEILHMGIGKILXXXXXCGYLLKNAEEVGYKHLLQGKHSVFIVLSVFGFIMVQVTLFCLLDWNLEGLKGLNWYQKMIGVLFQSVNSRHTGETIVDLSTVSQAILVLFVFMMYLPPYTSFLPLKDEGEKSERMKKKRGKVMDNLIFSQLSYLLIFIILVCITERKHLKDDPLNFNVFNIVFEVVSAYGNVGFSTGYSCERQLHRDANCENKWIGFVGKWSDEGKIILIIVMFFGRLKKFNMDGGKPWKLL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01855 343 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 93 342 - -
Car08g01855 343 Pfam Cation transport protein 226 300 IPR003445 GO:0006812|GO:0008324|GO:0055085
Car08g01855 343 Pfam Cation transport protein 134 207 IPR003445 GO:0006812|GO:0008324|GO:0055085
Car08g01855 343 PANTHER SODIUM TRANSPORTER HKT1 93 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01855 Car-Chr8 28494053 28498732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01855 113 342 Inorganic Solute Cotransporters AT4G10310 53.361 1.30e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01855 K24976 - rcu:8259800 335.109