Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01835 ATGGGTCGGCGAAAAAACAAGAATCAGAACAACGAAGAAGACAGAAACATGGCCATGAACAACAACAACAATAACCAAAACCACCTTCGATTTCAAGATGCTGATGAAGTCATCGAAGATGCTGCTGAGACATCTAACCTCGACCAATCCATGTGTGGCTGTGACCTTGATGATTCTGATGGCAAAACTAGCGCTGATTATTACTTCGATTCTTACTCTCATTTTGGAATTCATGAAGAAATGTTGAAGGATTCTGTAAGAACCAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTCGGTGCTGGGACTGGGATTTTATCACTATTCTGTGCCAAAGCAGGGGCAGAACATGTCTATGCTGTCGAGTGCTCTGATATGGCGGACATGGCTAAGGAGATAGTTGAAACTAATGGTTACTCTAAAGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCAGTTCCTAAAGTTGATATAATCATTTCGGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAGTGGCTTGTGGATGGTGGAATTGTGCTACCGGATATAGCATCTCTCTATCTTACTGCAATTGAAGATAAAGACTACAAAGAGGATAAAATAGAGTTTTGGAACAATGTATATGGGTTTAACATGAGCTGCATCAAGAAGCAAGCCTTAATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCAACAAACTGTCAGCTACTAAAGACAATGGACATCTCAAAAATGTCTTCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTGCTCGTGACGATTTTATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAGATCACGGGCTACACACTGGAAACAAACAGTCCTATATTTGGAAGATGTTTTGACCATTTGTGAGGGCGAGACAATTGTAGGGAGCATGACTGTGGCTCCAAATAAAAAGAATCCTCGGGATGTCGATATAATGCTCAAGTATTCATTGAATGGCAGGCGATGCAATGCTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1161 0.3936 MGRRKNKNQNNEEDRNMAMNNNNNNQNHLRFQDADEVIEDAAETSNLDQSMCGCDLDDSDGKTSADYYFDSYSHFGIHEEMLKDSVRTKTYQNVIYQNRFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVETNGYSKVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGIVLPDIASLYLTAIEDKDYKEDKIEFWNNVYGFNMSCIKKQALMEPLVDTVDQNQIATNCQLLKTMDISKMSSGDCSFTAPFKLVAARDDFIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCNASRVQYYKMR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01835 386 Gene3D - 211 386 - -
Car08g01835 386 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 33 386 - -
Car08g01835 386 MobiDBLite consensus disorder prediction 13 27 - -
Car08g01835 386 Gene3D Vaccinia Virus protein VP39 56 208 IPR029063 -
Car08g01835 386 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 33 386 IPR025799 GO:0016274|GO:0018216
Car08g01835 386 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 65 366 IPR025799 GO:0016274|GO:0018216
Car08g01835 386 CDD AdoMet_MTases 107 207 - -
Car08g01835 386 Pfam Ribosomal protein L11 methyltransferase (PrmA) 102 177 - -
Car08g01835 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 385 IPR029063 -
Car08g01835 386 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01835 Car-Chr8 28397406 28400809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01835 24 348 C2H2 Transcription Factor Family AT3G12270 37.176 1.45e-66 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01835 08 28397406 28400809 Car08g01835 08 28397406 28400809 ECH