Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01830 ATGGAAAACATTAAAGATACATCAATCTACCGCAATCCTGTCATATTGCAGAGTGAGGACTTAACAAAGTATATATTGGAGACTGCTGTTTACCCTAGAGAGCCAGAGGCTCTCAAAGAGCTGAGGAAAGCCACTGAGAATCACCCATGGGGTTTCATGGCTACTTTACCTGAGGCTGGTCAACTCATGACTATACTTTTGAAGCTGTTGAATCCCAAAAAGACACTTGAAGTGGGAGTCTTTACTGGGTACTCTCTTCTCCTCACTGCACTCAACATTCCTCATGATGGAAAGATTACAGCCATAGACATTGACAGGAAAAGTTATGAAGTTGGACTACCAGTCATAAAAAAGGCTGGAGTGGAACACAAGATTGATTTCATAGAATCTCCAGCTCTACCAATTTTGGATAATCTGTTAGAAGATCCAACAAATGAAGGAAGTTTTGACTTTGCATTCATTGATGCTGACAAAGAGAACTATGTCAAGTATCATGAGAGAATTATAAAACTGGTTAAGGTTGGTGGGTTACTTGTGTATGACAACACTCTATGGGGTGGACGTGTTGCTTGGCCTGAAGAGGATGTTCCACAACATGCCAAATCAGGAAGACAAGCAGCAATTGAATTCAACAAAACAATCACACAAGATTCTCGTGTTGAATTTGCTCTCACTTCCATTGGGGATGGACTCAGTGTTTGCAGGCGCATTGTGTAa 717 0.4114 MENIKDTSIYRNPVILQSEDLTKYILETAVYPREPEALKELRKATENHPWGFMATLPEAGQLMTILLKLLNPKKTLEVGVFTGYSLLLTALNIPHDGKITAIDIDRKSYEVGLPVIKKAGVEHKIDFIESPALPILDNLLEDPTNEGSFDFAFIDADKENYVKYHERIIKLVKVGGLLVYDNTLWGGRVAWPEEDVPQHAKSGRQAAIEFNKTITQDSRVEFALTSIGDGLSVCRRIV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01830 238 CDD AdoMet_MTases 76 180 - -
Car08g01830 238 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
Car08g01830 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Car08g01830 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Car08g01830 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Car08g01830 238 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 5 237 - -
Car08g01830 238 PANTHER O-METHYLTRANSFERASE-RELATED 5 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01830 Car-Chr8 28344815 28347571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01830 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.229 1.77e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01830 K00588 - gmx:100800911 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01830 08 28344815 28347571 Car08g01830 08 28344815 28347571 ECH