Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01829 ATGTTGGAGAAGGGCGCAGGTAGAAAAGAAGAGGTTGTTACTCGAGAGTACACCATTAACCTCCACAAGCGTCTCCATGGCTGCACCTTCAAGAAGAAGGCTCCCAATGCCATAAAGGAGATTAGGAAGTTTGCAAAGAAAGCCATGGGAACAGATGACGTGAGGGTAGATGTTAAATTGAACAAAGCTGTTTGGAGCCAGGGAATCAGAAGTGTACCTAGGCGTATTAGGGTACGTATCTCTCGCAAGAGAAACGACGATGAAGATGCCAAGGAAGAACTATACTCCCTTGTTACAGTTGTGGAAATTCCAAGGGATGAGCTCAAAGGGTTGGGCACCAAGGTTATAGATGATGAGGATTGA 363 0.4573 MLEKGAGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAKKAMGTDDVRVDVKLNKAVWSQGIRSVPRRIRVRISRKRNDDEDAKEELYSLVTVVEIPRDELKGLGTKVIDDED 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01829 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Car08g01829 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Car08g01829 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Car08g01829 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Car08g01829 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Car08g01829 120 PANTHER OS06G0319700 PROTEIN 4 120 - -
Car08g01829 120 Gene3D - 9 120 IPR023621 -
Car08g01829 120 PANTHER 60S RIBOSOMAL PROTEIN L31 4 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01829 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 80.672 2.61e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01829 K02910 - gmx:100499742 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01829 08 28340865 28342721 Car08g01829 08 28340865 28342721 ECH