Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01826 ATGACGGCGCAGCCACCGTCGAAGCCTCACGAATGGGAAACCCTAATAGAGAATTTTCAATCCGGCACCGGAATCGAAAAATGGAACTCTCTCGAACCACCTATCTCCGATCTTCTCTTATCCTCTCTTCTCCGCAAGGACTTTCCTCTTCAACTCAAACTCCAACTCCTCATTTTCCTCGACGAATTCTCCACTTCATTCTTCCCTCACAATCACCTCAACCGTCTCATTGAATCTATCAAAATCGTTCTCCAATCACCTCTCGAAGCCTCCGTTTACTTCACTCCGTTATTCAAGGAACACTTCATGATCTCCGTTACCTCCGTTATCGTTTGTTTCTCCGAAGAAGAGAACGTTGAAACAGTAACGGAGAATTTAGTTGAACTTCTGTTAACGGTTATTAACCGTCCAAATTTCGGTTCCGATCGTCACACACGCGCCATCGCCTGCGAGTGTTTGAGAGAATTAGAACGATCGAAACCGTGTTTACTTTCCGATGTGGTTGGACATTTATGGAGTCTTTGCCAGAACGAACGAACACACGCTTCACAATCTTACATCTTGCTTTTCACAACCGTTATTCATAACATTGTTCATAACAAACTCAGTGTCTCTATTCTCAATACATCGCATCCTATGCTCCCTTTCAACACGCCGCAGTGCGTGAATCGAGACGATTTTGGCTCTGATTCGGGTTTGAATACGAAGGAATTGAGGAGAGCGTTGGCGTTTTTGTTGGAGTGGCCTCAAGTGTTGACACCATGCGGAATGATGGAGTTTGTTTCTATGGTGATACCTGTGGTTGTGGCATTGGAATTGCAACCTTCAATGCTTAGGGTTCAGTTATTTGGGATGATTCATTCTTATGATCCTCTTTTATGCCATGTTGTTTTGACTATGTTTTTGCGTTTTATAGATGCTTTTGATGGTCAAGGTGAGGTTTCTAATAGACTCTTGTTGATTTCAAGAGAATCTCATCATTATTTGGTGTTTCGATTGTTGGCTATTCACTGGTTGTTGGGTTTCAATCAATTGGTTTTTAATAAACAACAATCATCATATATTGAGAAGAAGAGTGAACATGGAAATGAAGCTTGTTCAATTTTGTATCCTTCTTTGTTTGATCCATTGGCTCTGAAAGCATTGAAGCTTGACCTTCTTGCATCTGGCTCTGTATTGAGACTCAAAAGTGATTCAAATTCTAGTTCTCATGATGATGATGATGGTTGGATTGATCCAGTGAAGGTTTTCGAACAGGGTCTGCTTTCTGTATCGTCTTTTAAATGGTTGCCTCCAGCGAGCACAGAGATTGCGATTGCATTTCGTACCTTTCACAAGTTTCTTATTGCTGGATCATCTCATTCTGATAGTGATCCTTCCACCACAAGAAATCTGCTGGACTCCATGATATTTCGTACTTTGCAGGTGATGCTAGTAAACATGATGTTAGAGAGTCGGAAACTTGTTCCTGTTGTTGCTGCATTTGTGGACCGTTTATTATCATGTAAGAAGCATTCTTGGTTGGGTGAGCGCTTACTTCAGAAATTTGACGAGCACTTACTTCCAAAAGTGAAAATGGATTATAAGTTGGTTTATTGCTTCCCAATATTTGATAGAATTGCTGAGAATCAGACAATACCTCCGAGTGGATTGTTAGAGCTACTCACAAACTTCATGATTTTCCTTGTGGAGAAACACGGCCCGGATACAGTGATGAAATCTTGGTCCCAAGGAAGCAGAGCTCTTGGAATTTGTCGAACTATGTTGGTGCACCACCATAGTTCTAGATTGTTCCTTAGATTATCTCGTCTACTTTCTTTCACTTGTCTCCATTTTCCTGATTTGGAAGTCCGGGATAATTCCAGGACATACTTGCGTATGCTGGTCTGCATTCCGGGGAAGAAGCTTAGAGAGATCCTAAGCCTGGGAGGCACACTCCTTGGGATTTCACCTTCTTCACACCAAACCTCTTTCTTCAATGTTCAGTCACCTCGACCTTCCCAGAGATTCAAGACATTTAAAAACTTAACCTCCTGCATTCACTTTGAGCGTGTAACCCCATTGCTTGTTAAGCAGTTTTGGTCTTTGTCTTTATCAAGTTTAGTCGTGAGTAATAGCAAACCTGATTATCTGGAGGGTATCAGGGACCTCGAAGCCCCTATCGAGGATAAGGAATTTTCTGACAGTTCCAATTCTCAGGTCATTACTGAAACTGGAAGAACAAGTCAATCGCATGAGCCGCTTCGTGTTATGGACTCTAAAGTTGCAGAAATTTTGAACACATTAAGGAAGTACTTTTCCTGTATTCCTGACTTCAGATATATGGCAGGACTCAAAGTTAGAATATCATGTAGTTTGAGTTTTGAATCTAATACTTTCAATCGCATGTTGGGAATCAATAACACTGCCACACCCCAGGAAGAGATAGATGCACTTCCCGCTATATATGCTACTGTGTTAAATTTTTCCTCTTCTGCACCATATGGATCAATTCCATCATCTCGTATACCTTTTCTTCTTGGTGAACCTCACAGTAAAGATCATGCATCTCAAAATGCCGCCCTTAGTATAGTTCCTATTGGAAATGATTCTAGAAAAGAAGAAAACTATAGAGCTACCGTTGTGATCGATTTGGAGCCAAGGGAACCGACACCAGGTATAGTTGATGTTCACATTGAAACAAATGCAGAAAATGGTCAGATCATCCAAGGTCAACTTCAGGGAATCACAGTAGGCATAGAAGACATGTTTCTTGAGGCCATTGTTCCATCAGACATCCAAGAAGACGCAAGACCTCAGTACAACTTTAACTTGTTCACAGCTTTATGGGAAGCATGTGGCTCATCCTCTAGCACCGGGCGGGAAACCTTTCAATTGAAAGGGGGCAAAGGGATTGCTGCCATAAGTGGAACGCAATCTGTCAAGCTTCTTGACGTCTCTGCGACCTCTTTGATTCAGGCTACCGAGCGCCATTTGGCACGCTTTGTTGTAGGTGTGAGCGGGGAGCCACTTATTGATGCTGTATGGGAAGGGGGAATCATTCAGAATGTCATTTGGGAAGATACTTCCCGTGATGCCTCACCAGTTTCAAATCACAATTCAGGTCCACTTCGGCTTACATACAATAATGAAGAATTACCAATCCTCAATCAGCTTGTGATTATCTTGTTGTTATGGTGGATGAATCATGCATGCATATGTACTTGGATAGTTTCTTTTGGAACAAAAACAAGAGCTAATAGCCGAATGCAAGTCAATGGTGAGATAATTCATCACCAAACTTCAACGCCTTCGATTGATGTTTTAGTTCAAGCACAACAACAAACAGGCTTCATAAGCATTGATTGTGGTGGTCCAGAGAATCTTGAGTACACCGATGATACAAAAATAAAATACAGCACAGATGGATCTCACATACAAACAGGACTTAACATGAACATTTCTTCTGAGTATGCATATCCAAAGAATCCAAATCTACCATTACCACTCTCAGATCTCAGAAGTTTTCCTCAAGGAAAGAGGAACTGTTACCGATTAATTGCCGGAAGAAGAGGCAGTTTACATTTAATAAGAGCTTCTTTCTTGTATGGAAACTATGATGGAGAAAACAAACTACCTGAATTTGATCTCTATATTGATGTCAATTTTTGGTCATCGGTGAAATTCAGAAATGCTTCAGAAGAAGTTACATTGGAAATAATAAGTGTGGCGAAATCGGAGGAAACAAATGTTTGTCTTGTGAATAAAGGAGATGGAATTCCTTTTATATCAGCATTGGAACTTAGACCAATTAATAATTCAATTTATAACACTGAGTTTGGTGAATCTGCTTCACTTTTACTTTACAAAAGATTTGACATTGGATTAATCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCATTTAGTTCCTCTTCGTGGAAATCTTTAAACACTTCTTCAGAAATTGATGTTAATGGAGATGGATTTAAAGTACCATTTGAAGTTATTAGAACTGCTGCTACGCCAAGGAATGAAAATGATAGTTTGGAATTTTCTTGGATTCCAAGTAATCCAAATTTGAAATTTTATGTCTTTTTGTATTTTGCTGAATTGGTGAAACTTAAGAAAACTCAGCTGAGAAAATTCAATATTTCTTGGAATGGTTCTCCTTTGACTAAATCATTAGTACCAAGCTACTTGTACGCAACCACTGTTTTTAATTTGAAGTCGTTGGTGGCGAACGAGCATCGAATTTCAATACAGAAAACCGAAGATTCGACACTTCCACCTATTCTTAATGCAGTGGAGATTTATGTACTAAGACAAGTTGAAGCACTTCCAACATTTGAAGAAGATGTTGAAGCTATAAGGAGCGTAAAAGAAAGTTATAGAGTTCAAAGAAATTGGGTAGGTGATCCATGTGAACCAAAGAACTACACTTGGGAGGGCTTAAAATGCAACTACAGCACTTCACTTCCTCCAAGAATTGTATCACTGAATCTGAGCAGAAGCAGTCTGAGTGGGACAATAGCTCCTGCCATTTCCAACCTGTCTTTCTTGGAATCTTTGGATTTATGTAACAATAGCTTAACTGGATCAATGCCTCAGTTTTTGGAAGAATTGAGTTCCCTTAAATATTTGAATTTAAGAGGCAACCAACTTTCAGGTTATGTCTCTACCACTCTCTTACAAAGATCAAAGACTGGATTACTTACTTTGAGGGTGGATGATAAAAATCTCTCTGATTCAGATTCAAGTAACAAAAAGAAGGTAATTGTTTCCATTGTGGCATCACTATCATCAGTTTTAGTTGTATTGGTCTTTGCCATTCTCTATTGGAAGCATAGAAGAAATGAACAATCAGAGGAGGAGATGAACATGGTGTATAAAGGAGTAAAAACTGTAGAATCAAAGAAGTGGCAATATACTTATACTGAGGTGTTGGAAATCACCAACAACTTTGAAATGATCATTGGGAAGGGAGGATTTGGAACTGTTTACTGTGGTCAGATGAAAGATGGCAATAAAGTTGCAGTCAAGATGCTTTCTCCATCTTCAGCTCAGGGGCCAAAGGAATTTCAAACTGAAGCTGAACTTTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGTGACAAGATGGCACTCATATACGAGTACATGGCCAGTGGCAACCTGAAAGATTGCCTCTCAGATAAAAATTCACATTGTTTGAGTTGGGAAAGGAGACTTCAAATAGCAATTGATGCTGCAGAGGGATTGGACTACCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAGTCAGCTAACATTCTTCTAAGTGAAGACTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAACAGAAATGCAGAATCTGCAATGATTCATGTTGATGATAGAAATGAAACATCTACAATCATGGGAACAATGGGTTATCTTGATCCAGAGTACTACAAATTAAGAAACTTGAATGAAAAAAGTGACATATATAGCTATGGAGTAGTACTATTGGAATTAATCACAGGTCTCCCTGCAGTAATGAAAGGAAAGCCATCAATACACATACTTGAGTTTGTAATACCACAACTTGAAAAGGGTGAAATAAGTAGAATCATAGATCCAAGACTCCAAGGAAAATTTGATATAAATTCAGGATGGAAAGCATTAGGATTAGCAATTGCATGCACTGCATCAACCTCAATTCAGAGACCAACAATGAGTGCTGTGTTATCAGAGCTGAAACAATGTGTTAAATTGGAGTCACATAATGATAGTGAAATATTTGTGGCACCACGACATATCTATAGTGAACTTTATAGTTCATCTGAAGCATTTAAATCTATAGATAGTGAATCTATGACATATTCTTTCCCAAGGTGA 5937 0.3923 MTAQPPSKPHEWETLIENFQSGTGIEKWNSLEPPISDLLLSSLLRKDFPLQLKLQLLIFLDEFSTSFFPHNHLNRLIESIKIVLQSPLEASVYFTPLFKEHFMISVTSVIVCFSEEENVETVTENLVELLLTVINRPNFGSDRHTRAIACECLRELERSKPCLLSDVVGHLWSLCQNERTHASQSYILLFTTVIHNIVHNKLSVSILNTSHPMLPFNTPQCVNRDDFGSDSGLNTKELRRALAFLLEWPQVLTPCGMMEFVSMVIPVVVALELQPSMLRVQLFGMIHSYDPLLCHVVLTMFLRFIDAFDGQGEVSNRLLLISRESHHYLVFRLLAIHWLLGFNQLVFNKQQSSYIEKKSEHGNEACSILYPSLFDPLALKALKLDLLASGSVLRLKSDSNSSSHDDDDGWIDPVKVFEQGLLSVSSFKWLPPASTEIAIAFRTFHKFLIAGSSHSDSDPSTTRNLLDSMIFRTLQVMLVNMMLESRKLVPVVAAFVDRLLSCKKHSWLGERLLQKFDEHLLPKVKMDYKLVYCFPIFDRIAENQTIPPSGLLELLTNFMIFLVEKHGPDTVMKSWSQGSRALGICRTMLVHHHSSRLFLRLSRLLSFTCLHFPDLEVRDNSRTYLRMLVCIPGKKLREILSLGGTLLGISPSSHQTSFFNVQSPRPSQRFKTFKNLTSCIHFERVTPLLVKQFWSLSLSSLVVSNSKPDYLEGIRDLEAPIEDKEFSDSSNSQVITETGRTSQSHEPLRVMDSKVAEILNTLRKYFSCIPDFRYMAGLKVRISCSLSFESNTFNRMLGINNTATPQEEIDALPAIYATVLNFSSSAPYGSIPSSRIPFLLGEPHSKDHASQNAALSIVPIGNDSRKEENYRATVVIDLEPREPTPGIVDVHIETNAENGQIIQGQLQGITVGIEDMFLEAIVPSDIQEDARPQYNFNLFTALWEACGSSSSTGRETFQLKGGKGIAAISGTQSVKLLDVSATSLIQATERHLARFVVGVSGEPLIDAVWEGGIIQNVIWEDTSRDASPVSNHNSGPLRLTYNNEELPILNQLVIILLLWWMNHACICTWIVSFGTKTRANSRMQVNGEIIHHQTSTPSIDVLVQAQQQTGFISIDCGGPENLEYTDDTKIKYSTDGSHIQTGLNMNISSEYAYPKNPNLPLPLSDLRSFPQGKRNCYRLIAGRRGSLHLIRASFLYGNYDGENKLPEFDLYIDVNFWSSVKFRNASEEVTLEIISVAKSEETNVCLVNKGDGIPFISALELRPINNSIYNTEFGESASLLLYKRFDIGLINGSGRYEDDVYDRIWFPFSSSSWKSLNTSSEIDVNGDGFKVPFEVIRTAATPRNENDSLEFSWIPSNPNLKFYVFLYFAELVKLKKTQLRKFNISWNGSPLTKSLVPSYLYATTVFNLKSLVANEHRISIQKTEDSTLPPILNAVEIYVLRQVEALPTFEEDVEAIRSVKESYRVQRNWVGDPCEPKNYTWEGLKCNYSTSLPPRIVSLNLSRSSLSGTIAPAISNLSFLESLDLCNNSLTGSMPQFLEELSSLKYLNLRGNQLSGYVSTTLLQRSKTGLLTLRVDDKNLSDSDSSNKKKVIVSIVASLSSVLVVLVFAILYWKHRRNEQSEEEMNMVYKGVKTVESKKWQYTYTEVLEITNNFEMIIGKGGFGTVYCGQMKDGNKVAVKMLSPSSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYMASGNLKDCLSDKNSHCLSWERRLQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNRNAESAMIHVDDRNETSTIMGTMGYLDPEYYKLRNLNEKSDIYSYGVVLLELITGLPAVMKGKPSIHILEFVIPQLEKGEISRIIDPRLQGKFDINSGWKALGLAIACTASTSIQRPTMSAVLSELKQCVKLESHNDSEIFVAPRHIYSELYSSSEAFKSIDSESMTYSFPR 1978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01826 1978 Gene3D Ribonuclease Inhibitor 1443 1569 IPR032675 -
Car08g01826 1978 ProSiteProfiles Protein kinase domain profile. 1652 1948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01826 1978 SMART serkin_6 1652 1936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01826 1978 Pfam Leucine rich repeat 1495 1554 IPR001611 GO:0005515
Car08g01826 1978 SUPERFAMILY L domain-like 1468 1583 - -
Car08g01826 1978 PANTHER OS07G0107800 PROTEIN-RELATED 1098 1942 - -
Car08g01826 1978 ProSitePatterns Protein kinases ATP-binding region signature. 1658 1680 IPR017441 GO:0005524
Car08g01826 1978 CDD STKc_IRAK 1658 1934 - -
Car08g01826 1978 Gene3D Transferase(Phosphotransferase) domain 1 1728 1952 - -
Car08g01826 1978 Pfam Protein tyrosine and serine/threonine kinase 1655 1931 IPR001245 GO:0004672|GO:0006468
Car08g01826 1978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1772 1784 IPR008271 GO:0004672|GO:0006468
Car08g01826 1978 Gene3D Phosphorylase Kinase; domain 1 1634 1727 - -
Car08g01826 1978 Pfam Malectin-like domain 1114 1438 IPR024788 -
Car08g01826 1978 PANTHER BNAC07G41790D PROTEIN 1098 1942 - -
Car08g01826 1978 SUPERFAMILY Protein kinase-like (PK-like) 1637 1932 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01826 Car-Chr8 28315946 28327394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01826 1095 1963 Receptor kinase-like Gene Family AT4G29180 50.395 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car08g01826 Malectin_like 3.4e-104 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01826 K19022 - gmx:100801171 1508.81