Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01813 ATGAAAACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCTGCTCAACAAACACCCATCACTTCATTTCTGACTGCAAGTGGCACATTTCATGATGGAGATCTGCTCTTGAACCAAAAAGGGTTGCGTTTAATCTCTGAAGAAAAGGAATCAAGGCCTTCAGATGCTAAGGATCTCGAATTCGACTTCACGTTGGACGACCTTGAGACCATCAAAGTAATCGGAAAAGGAAGTGGTGGCGTAGTGCAACTCGTTCGCCATAAGTGGGTCGGAAAATTGTTTGCTTTGAAGGTAATTCAGATGAATATACAAGAGGATATTAGGAAACAGATTGTTCAGGAGCTGAAAATAAACCAAGCATCATTATGTCCACATGTTGTAGTTTGCTACCATTCATTCTATCATAATGGAGTTATATCTCTTGTATTAGAATACATGGATCGTGGTTCTCTAGTAGATGTAATCAGACAAGTTAATACAATTCTCGAACCATATCTTGCTGTGGTTTGTAAGCAGGTGTTACAGGGTCTTGTTTACTTGCACAATGAAAGACATGTAATACATAGAGACATAAAACCATCCAATCTTTTAGTAAATCACAAAGGGGAAGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCTAGTTCAATGGGCCAAAGAGATACATTTGTTGGAACTTATAATTACATGTCGCCGGAAAGAATCAGTGGGAGTACTTATGATTACAGCTGTGACATATGGAGTTTGGGGATGGTAGTACTTGAGTGTGCTATAGGACGGTTTCCTTATATACAATCTGAAGATCAACAAGCATGGCCTAGTTTCTATGAGCTTTTGGCAGCAATTGTGGAAAGTCCCCCACCTTCAGCTCCTCCTGATCAGTTCTCCCCTGAGTTCTGTTCATTTGTGTCATCCTGCATAAAAAAGGATCCTCGTGAAAGATCAACGTCCTTAGAgcttctgGATCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTAGATCTTGGAATTTTAGTAGGTAGCTTGGAACCTCCTATAAATTTTACCAGATGA 1065 0.3944 MKTKTPLKQLKLSVPAQQTPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDAKDLEFDFTLDDLETIKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQASLCPHVVVCYHSFYHNGVISLVLEYMDRGSLVDVIRQVNTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSCDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAPPDQFSPEFCSFVSSCIKKDPRERSTSLELLDHPFIKKFEDKDLDLGILVGSLEPPINFTR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01813 354 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 353 - -
Car08g01813 354 SUPERFAMILY Protein kinase-like (PK-like) 66 340 IPR011009 -
Car08g01813 354 SMART serkin_6 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01813 354 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 353 - -
Car08g01813 354 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01813 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Car08g01813 354 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01813 354 Gene3D Transferase(Phosphotransferase) domain 1 150 343 - -
Car08g01813 354 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Car08g01813 354 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Car08g01813 354 CDD PKc_MAPKK_plant_like 67 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01813 Car-Chr8 28197343 28201537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01813 1 354 MAP Kinase Kinase Gene Family AT5G56580 84.789 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Car08g01813 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01813 K04368 - gmx:100786284 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01813 08 28197343 28201537 Car08g01813 08 28197343 28201537 ECH