Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01809 ATGGGGAACAAAATCGCGCGCACAACGCAAGTTTCAGCGTCGGAGTATTACCTACAGGATTTACCGTCGACGTATAATCTGGTTCTGAAAGAAGTTCTTGGACGCGGTCGTTTCTTCAAGTCCATTCAGTGTAAACACGACGAAGGTTTGGTTCTCGTCAAGGTTTATTTCAAACGTGGCAATTTCATCAATCTCTCTGATTATGAACGACGTCTTTCTCAGATCAAAGATATTTTCAGTAACATCGATCATCCTCACGTTTGGCCttttcagTTTTGGCAAGAAACAGATAAAGCAGCTTATCTTTTGAGGCAATATTTCTTCCATAATTTAGATGATCGATTAAGTACTCGCCCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGAGCCACGAGAAGGGAGTGTGTCATGGCGATATCAAGTGTGAAAATGTGCTAATTACATCATCGAATTGGCTTTACCTTGCTGACTTTGCCTCTTTCAAACCCACTTACATTCCGGATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACGAGTGGCAGAAGACTCTGCTATCTGGCACCTGAGAGGTTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATTCCCCCCTAAAGCCATCAATGGATCTATTTGCTGTCGGGTGTGTTATTGCTGAACTTTTCCTTGACGGGCAACCACTATTTGAACTGTCTCAACTTCTTGCATATCGCAGAAGACAACATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGTAAGATGATTCAACACATGATTCAGTTAGAACCAAAGTCCCGATTTTCTGCTGAAAAATACCTAAAGGAATATGCTGGAGTTGTATTCCCTTCCTATTTTTCACGATTTCTGCATGATTTTTACTGTTGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTACTATGCCAGAGTGCTTTCCAGGAAATACTTAAGCAAATGATGAACAAGCAGTCATCTAATGATGCAGGTGTTACTTCTAGAAAACTTTTGGAAGAGATCGTTGCCAAAGAAAGCGCGAGTTTCATGAAGGACTCACAAAGGAAAAGAGAGGACTTAGGCAAAGGGTTACTAAGGGATGCTAAAAATAACAATAAGAATCCATCTGGTCCTCAGCCAGTAATAGGAAATGCACAAAATTCTACCTTCCCTGAAAATCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGATCATCCCTTTTTGAAAAGTATTACTATGGACAACTTAAATTCGTTGATGTTAGAGTATGATAGTCAGTCAGATACATTTGGAACTCCTTTTCTACCATTACCAAGGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCGCCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGACGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTTCAATGCTTTCTGAACCATCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTTGCCTTAGTGCGTGATTTTCCTCCCAGTGATGCAAAGATATTTCCCGAGTATATTCTTCCAATGCTTTCTATGCTTCCCGATGATCCTGAGGAAAGTGTGCGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTCACTGCTTATGGCTTTTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTCCTTGAGAAACTGAGTTTGCCACGGAAGCCATCGACATCATCTTCTCAGACCTCTGAGAGAATGAAGATGATAAATAGTGATGTCCAGCTTCTGCATCTGAGGAAATCAATTGCAGAGGTTGTTCAAGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCAATTCTTCAGGACATCGGTAAACTTTGCTACTTCTTTGGTGTGAGACAAAGTAATGACATTCTCTTACCTATCCTTCCTGCCTTCTTAAATGACCAAGATGAGCAAGTAAGGACAGTATTCTACGAAAAGATTGTTTATGTATGCTTTTTTGTGGGCCAAAGAAGTGTAGAGGAATATCTATTACCTTACATTGAGCAAGCTTTAAGTGACGCAACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGACTTTTCTATGCAAAAGCGGTTTCTTGCGGAAGACGATATTGCTTCAAATGTTCGAGCGTGCCTTTCCTTTATTGTGTAATCCTAGTAAATGGGTACGAAGATCAGTTGTCTCTTTCATTGCTGCTTGCAGCAAAAGCCTGGGTAAAGTGGATTCTGATGCTTTCCTTGCTCGTGTTATACGTCCTTTCATTAGTAGACGGCCTGTGCCTCTTGCTTCCGATAAAGATCTTCttagaatattagaaaatatcttataa 2499 0.4066 MGNKIARTTQVSASEYYLQDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGNFINLSDYERRLSQIKDIFSNIDHPHVWPFQFWQETDKAAYLLRQYFFHNLDDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPDDDPSDFSFFFDTSGRRLCYLAPERFYEHGGEMQVAQDSPLKPSMDLFAVGCVIAELFLDGQPLFELSQLLAYRRRQHDPSQHLEKIPDIGIRKMIQHMIQLEPKSRFSAEKYLKEYAGVVFPSYFSRFLHDFYCCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSNDAGVTSRKLLEEIVAKESASFMKDSQRKREDLGKGLLRDAKNNNKNPSGPQPVIGNAQNSTFPENLKSLQSPGELLQTISNAFRGNDHPFLKSITMDNLNSLMLEYDSQSDTFGTPFLPLPRDSMRCEGMVLITSLLCSCIRNVKLPRLRRAAVLLLKASALYIDDEDRLQRVIPYVISMLSEPSAIVRCAALETLCDILALVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLEKLSLPRKPSTSSSQTSERMKMINSDVQLLHLRKSIAEVVQELVMGPKQTPNIRRAILQDIGKLCYFFGVRQSNDILLPILPAFLNDQDEQVRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDATEAVIVRALECLTFLCKSGFLRKTILLQMFERAFPLLCNPSKWVRRSVVSFIAACSKSLGKVDSDAFLARVIRPFISRRPVPLASDKDLLRILENIL 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01809 832 CDD STKc_Vps15 16 303 - -
Car08g01809 832 MobiDBLite consensus disorder prediction 381 409 - -
Car08g01809 832 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01809 832 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01809 832 ProSiteProfiles HEAT repeat profile. 685 723 IPR021133 -
Car08g01809 832 SUPERFAMILY ARM repeat 411 797 IPR016024 -
Car08g01809 832 Gene3D Transferase(Phosphotransferase) domain 1 22 375 - -
Car08g01809 832 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01809 832 Gene3D - 656 823 IPR011989 -
Car08g01809 832 Gene3D - 467 611 IPR011989 -
Car08g01809 832 MobiDBLite consensus disorder prediction 385 409 - -
Car08g01809 832 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 829 IPR045162 GO:0004674|GO:0016236|GO:0045324
Car08g01809 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Car08g01809 832 SUPERFAMILY Protein kinase-like (PK-like) 24 292 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01809 Car-Chr8 28141827 28146959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01809 23 252 AGC Kinase Gene Family AT5G04510 23.207 3.83e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Car08g01809 Pkinase 4.4e-22 CL0016