Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01808 ATGGGGAACAAAATCGCGCGCACGACGCAAGTTTCAGCGTCAGAGTATTACCTACACGAGTTACCGTCGACGTATAATCTGGTTCTGAAAGAAGTTCTTGGACGCGGTCGTTTCTTCAAATCGATTCAGTGTAAACACGACGAAGGTTTGGTTCTCGTCAAAGTTTATTTCAAACGTGGCGATTTCATCGATCTCTCTGATTATGAACGACGTCTTTCTCAGATCAAAGATATTTTCAGTAACATTGATCATCCTCACGTTTGGCCttttcagTTTTGGCAAGAAACGGATAAAGCAGCTTATCTTTTGAGGCAATATTTCTTCCATAATTTGCATGATCGATTAAGTACTCGACCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGAGCCATGAGAAGGGAGTGTGTCATGGCGATATCAAGTGTGAAAATGTGCTAATTACGTCATCGAATTGGGTTTACCTTGCTGACTTTGCCTCTTTCAAACCCACTTACATTCCGTATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACGGGTGGCAGAAGACTCTGCTATCTGGCACCTGAGAGGTTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATTCCCCCCTAAAGCCATCAATGGATTTATTTGCTGTCGGGTGTGTAATTGCTGAACTTTTCCTTGAGGGCCAGCCACTATTTGAACTGTCTCAACTTCTTGCATATCGCAGAGGACAACATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGTAAGATGATTCAACACATGATTCAGTTAGAACCAGAGTCTCGATTTTCTGCTGAAGAATACCTAAAGGAATATGCAGGAGTTGTATTCCCTACCTATTTTTCACCATTTCTGCATGATTTTTACCGTTGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTACTATGCCAGAGTGCTTTCCAGGAGATACTTAAGCAAATGATGAACAAACACTCATCTGATGATGCAGGTGTTACTTCTGGAGAACTTTTGGAAGAGATCGTTGCCAAAGAAAGCGCAAGTTTCATGAAGGACTCGCGAAGGAAAAGAGAGGACATAGGCAAAGGCTTAGTTCATGATCAGTATCAACTTCTTGGTGATATTAATAGCCTACTAAGGGGTGCTAAAAATAATAATAAGAATCCATCTGGTCCACAGCAAGTAATAGGAACTACACAAAATTCTAACTTCTCTGAAAATCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGATCATCCCTTTTTGAAAAGTATTACTATGGACAATTTAAATTCGTTGATGTCAGAGTATGATAGTCAGTTAGATACATTTGGAACGCCTTTTCTACCATTACCAAAGGGTAGTATGATTTGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGACGATGAAGATCGATTGCAGCGTGTTATCCCATATGTGATTGCAATGCTTTCTGACCCAGCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCATAGTGCGTGATTTTCCTCCCAGTGATGCAAAGATATTTCCTGAGTATATTCTTCCTATGCTTTCTATGCTTCCCGATGATCCCGAGGAAAGTGTGCGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTCACTGCTTATGGCTTTTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTTCTTGATGAACTGAGTTTGCCACTGAAGCCATTGACATCATCCACTCAGAACTCTGGGAGAATGAAGATGATAAATAGTGATGTCCAGCTTCTGCATCTGAGGAAATCAATTGCAGAGGTTGTTCAAGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCACTTCTTCAGGACATCGGTAAACTTTGCTACTTCTTTGGTGTGAGACAAAGTAATGACACTCTCTTACCTATCCTTCCTGCCTTCTTAAATGACCGAGACGAGCAATTAAGGACGGTATTCTACGAAAAGATTGTTTATGTATGCTTTTTTGTGGGCCAAAGAAGTGTAGAGGAATATCTATTACCTTACATTGAGCAAGCTTTAAGTGACGTAACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGACTATTCTATGCAAAAGTGGTTTCTTCCGGAAGAGGATATTGCTTCAAATGATCGAGCGTGCCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCAGTCGTCTCTTTCATTGCTGCTAGCAGCGAAAGCCTGGGTGTAGTGGATTCTGATGTTTTCCTTGCTCCTGTTATACGACCTTTCCTTCGTAGACAGCCTGTGTCTCTTGCTTCAGAGAAAGCCCTTTTGTCATGTTTAAAACCTCCTGTCTCAAGACAGGTATTCTATGAAGTCTTGGAGAACTCCAGGAGTTCGGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAGTCTAAAATATGGGAAATGGATTTATTAAAAAAAGGAATCGATGAGTTGGACTCGTTAAATAGCTGGGCTGACAAGCAGCAAGGTTTGGGGGCTCAACAAACTGTTGGATCTTCCTTCCAACAGCCAGGGTTAACTGATTGTGACAAAGCTGAGGCAAAATTAAGAGATATGGGGGCCTTTATGCATAGTGATAGCAATATGGTGGGACACCGTGATCCCCAATGCTTGGATAAGTTACAGTTTTCGGGATTTATGTCACCAACCTTTAGTGGTGTAAACAGTTTGACATATGACAAGCCATCAGAAGGCATACCTTTGTACTCCTTCAGTGTGGACAGGAGAGGAATGGGAGTACCTCCTGCTGCATCCGATTGTCCAGTGCAAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTAATTTGGCCAACTCAGTTCCAGCACCAAAGCTTTTTTCAGGTTCTTTTAGCATGAGCAATGGTTCTAAACAGTTCCACCGAGTGGTACATGAACCAGATCCTAAGGAAAATGAGACAGCCTTTGTAAATAGCACATTTCAAGATGTGGGATTATCTTCTAATATTAAAGGTACACCAATTTCACTAGAAGATGCAGCTGCCCAAGCTGATATATCAGGATTTCAATCTTTTGCTCGAACATCCATTCCTGATTCTGGTTGGAGACCGCGTGGGGTGTTGGTTGCACACCTCCAGGAGCACCGTTCAGCAGTCAGTGACATAGCAATTTCTTCAGATCACAGTTTTTTTGTGAGTGCATCTGACGACTCTACAGTCAAGATTTGGGATTCCAAAAAGCTGGAAAAAGACATTTCATTCAGGTCGAAGCTAACTTATCACCTTGAGGGAAGCCGTGCGTTATGTGTAGCAATGCTTCCAGGTTCAGCACAAGTGGTAGTTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATATCTAGAGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTGATATCACAAAGAAGGATACCAAAGAGGGTGCCATACTTGGCCTTTTAAATTGCCCTGTGGATAACTATAGCATTATGTATAGCACCCAGAACCGTGGCATTCATCTATGGGACACTAGGTCAAGTTCTAAAAATTGGACATTGAAAGCTACTCCTGATGAGGGCTACACCTTGTCTCTAGCATCAGGGCCTTGTTCCAACTGGTTTGTATCAGGGTCATCCAGGGGTGTAGTTACACTTTGGGATCTTAGATTTCTTGTACCTGTGAACTCTTGGAAGTACTCTCATGCTTGTCCAATAGAAAAGATTTGTCTCTTTCTTCCTCCTCCAAATGCTTCTCTGTCTTCGACCACTAGGCCCCTTGTTTATGTTGCTGCGGGTTACAATGAAGTTTCACTTTGGAATGCAGAGAATGCTAGCTGCCACCAGGTACTGAGGACAGCCAATTATGAAAGTGATGCAGAAATGTCTGATATGCCTTGGGCCTTGGCCAAACCTTCAAGTAAGCCAACTTCTCAATCAGATCCAAGACGAAATGTTAATCGCAAGTACAGAGTTGATGAGCTAAATGAACCTCCTCCTCGTCTTCCTGGTATTCGCACATTACTTCCCTTACCAGGGGGTGATTTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTACAGTCCTGACAGAAGTTACTGTGTTTGTGGACCAAACCTTAAAGGTGTTGGAAATGATGATTTTTACGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAAACAAAAAGACGTCCTCTTGCAACCAAGCTGACAGCAAAGGCAATTCTTACAGCCGCTGCCACTGATTCTGCCGGTTGCCATCGCGATTCTGTTGTTTCTGTGGCTTCGGTTAAGTTAAACCAGAGACTTCTACTTTCAAGTGGTAGAGATGGAGCCATCAAGGTTTGGAAGTAA 4617 0.4206 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLSDYERRLSQIKDIFSNIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWVYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDSPLKPSMDLFAVGCVIAELFLEGQPLFELSQLLAYRRGQHDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEEYLKEYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKHSSDDAGVTSGELLEEIVAKESASFMKDSRRKREDIGKGLVHDQYQLLGDINSLLRGAKNNNKNPSGPQQVIGTTQNSNFSENLKSLQSPGELLQTISNAFRGNDHPFLKSITMDNLNSLMSEYDSQLDTFGTPFLPLPKGSMICEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDPAAIVRCAALETLCDILPIVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSLPLKPLTSSTQNSGRMKMINSDVQLLHLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDTLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDVTEAVIVRALECLTILCKSGFFRKRILLQMIERAFPLLCYPSEWVRRSVVSFIAASSESLGVVDSDVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKIWEMDLLKKGIDELDSLNSWADKQQGLGAQQTVGSSFQQPGLTDCDKAEAKLRDMGAFMHSDSNMVGHRDPQCLDKLQFSGFMSPTFSGVNSLTYDKPSEGIPLYSFSVDRRGMGVPPAASDCPVQMNSLGVSSSAMPWVNPLSKSFNLANSVPAPKLFSGSFSMSNGSKQFHRVVHEPDPKENETAFVNSTFQDVGLSSNIKGTPISLEDAAAQADISGFQSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAISSDHSFFVSASDDSTVKIWDSKKLEKDISFRSKLTYHLEGSRALCVAMLPGSAQVVVGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDTKEGAILGLLNCPVDNYSIMYSTQNRGIHLWDTRSSSKNWTLKATPDEGYTLSLASGPCSNWFVSGSSRGVVTLWDLRFLVPVNSWKYSHACPIEKICLFLPPPNASLSSTTRPLVYVAAGYNEVSLWNAENASCHQVLRTANYESDAEMSDMPWALAKPSSKPTSQSDPRRNVNRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCVCGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLATKLTAKAILTAAATDSAGCHRDSVVSVASVKLNQRLLLSSGRDGAIKVWK 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01808 1538 ProSiteProfiles Trp-Asp (WD) repeats profile. 1505 1538 IPR001680 GO:0005515
Car08g01808 1538 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01808 1538 Gene3D - 1061 1224 IPR015943 GO:0005515
Car08g01808 1538 Gene3D Transferase(Phosphotransferase) domain 1 21 368 - -
Car08g01808 1538 CDD STKc_Vps15 16 303 - -
Car08g01808 1538 Gene3D - 1225 1538 IPR015943 GO:0005515
Car08g01808 1538 ProSiteProfiles HEAT repeat profile. 699 737 IPR021133 -
Car08g01808 1538 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1122 1154 - -
Car08g01808 1538 SUPERFAMILY Protein kinase-like (PK-like) 26 321 IPR011009 -
Car08g01808 1538 SUPERFAMILY WD40 repeat-like 1112 1538 IPR036322 GO:0005515
Car08g01808 1538 Pfam WD domain, G-beta repeat 1118 1154 IPR001680 GO:0005515
Car08g01808 1538 SMART serkin_6 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01808 1538 SMART WD40_4 1410 1444 IPR001680 GO:0005515
Car08g01808 1538 SMART WD40_4 1115 1154 IPR001680 GO:0005515
Car08g01808 1538 SMART WD40_4 1262 1303 IPR001680 GO:0005515
Car08g01808 1538 SMART WD40_4 1165 1202 IPR001680 GO:0005515
Car08g01808 1538 SMART WD40_4 1498 1538 IPR001680 GO:0005515
Car08g01808 1538 SUPERFAMILY ARM repeat 420 825 IPR016024 -
Car08g01808 1538 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1505 1538 - -
Car08g01808 1538 Gene3D - 445 627 IPR011989 -
Car08g01808 1538 Gene3D - 670 843 IPR011989 -
Car08g01808 1538 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1538 IPR045162 GO:0004674|GO:0016236|GO:0045324
Car08g01808 1538 ProSiteProfiles HEAT repeat profile. 531 563 IPR021133 -
Car08g01808 1538 ProSiteProfiles Trp-Asp (WD) repeats profile. 1122 1154 IPR001680 GO:0005515
Car08g01808 1538 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01808 1538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Car08g01808 1538 Pfam HEAT repeat 531 560 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01808 Car-Chr8 28075993 28084641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01808 31 324 AGC Kinase Gene Family AT3G08730 24.620 5.01e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Car08g01808 Pkinase 9.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01808 K08333 - gmx:100818467 2730.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01808 08 28075993 28084641 Car08g01808 08 28075993 28084641 ECH