Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01803 atgacaaaagaatctacacaaTCATATATCAAATTACAAATCTTCATTCTCTTTTTCACCTATGCAAATTCTCAAACTCAATTATTATATGATCAAGAACATGAAACCCTAATGAAAATAAAAAATTATTTTCATAATCCATTTTTCCTAAGTCATTGGACTTCATCAAATTCATCTCATTGTTCATGGCCAGAAATCATTTGCAAAAATGATTCAATCACTTCACTTTCTATGATTAACACAAACATTACTCAAACATTACCAATTTTTCTATGTGACCTAAAAAACCTAACTCACATTGATTTTCAACTTAATTACATTCCAAAAGAGTTTCCAAAATCACTTTACAATTGTTCAAAGCTTGAGTACCTTGATCTCTCAATGAATTTTTTCGTCGGTAAGATTCCCGATGACATCGATCGGTTGTCGAATTTGCGCCATCTTAGCCTTGGTGGGAACAATTTTTCAGGTGATATTCCAATGAGTATTGGAAAATTGAAGAAACTGAAAAGTCTTGAACTTTATCAGTGTCAATTCAATGGTACTATTTCTGATGAAATTGGTAATTTGGTAGATCTTGAAACTTTAAAAATGTTTTCAAATAGTATGCTTCCTAATACAACTAAGTTTCCATCTAGTATTACCAAGTTGAAGAAATTAAGGGTTTTTCATATGTATGACTCTAACTTGTTTGGTGAAATTCCTGAAACAATTGGAGAAATGATGGATTTGGAGTATTTGGATTTATCAGGAAATTTTTTGAGTGGAAAAATTCCAAATGGTTTGTTCAGTTTGAAGAATCTTAGCATACTTTATCTTTACAAGAATAATCTTTCTGGAGAGATACCTGAAGTGGTTGAAGCATCTGAGTTAACGGTTTTCGATCTTTCGATGAATAATCTCACTGGAAAAATACCAGATGATTTTGGAAAACTTGAAAAGCTAAACTATTTCTGTTTGTTTATGAATCAACTATCCGGAGAGGTACCGGAAAGTATCGGTCGGCTGCCTGCTCTGACTGATTTTATCGTTTTTCAAAATAATTTATCAGGTACTTTTTCTCAAGATTTTGGTAGGTACTCAAAACTTGAAACTTTTCAGGTTGCATCTAACAGTTTCACAGGAAATTTGCCTCATAATTTGTGTTATCATGGAAAGTTTGTTGGTTTAACTGCTTATGACAATAGCCTAAGTGGCGAGTTGCCGAAATCTTTAGGTAGTTGTAGCAGTTTACAGTATCTGAGAGTTGAGAATAATGAGTTTTCTGGTAACATTCCTAATGGTTTATGGACATCTATGAACTTGTCAGCAATTATGTTAAGTGAGAACAAGTTCACTGGTGAGCTTCCTGAAAGATTGTCTCGGAAACTATCGACAGTCGCCGTTAGTTACAATCGGTTTTCTGGTAGAATTCCGGATGGAGTGTCGTCTTGGAAGAATGTTGTGAAGTTCAATGCTAGTCACAACTTTTTCAATGGAAGTATACCATTGAATTTAACATCTCTTCCTCAGTTAACGACACTTCTACTTGATCACAACCAGTTCACCGGTTCGCTTCCATCAGATATAATTTCATGGAAGTCCTTAGTAACACTAAATTTGAGCAATAATCAATTGTCTGGAGATATACCCGATGCAATTTGTCAGTTACCTGCTCTTAACATATTGGACTTATCAGAAAACAAAATCTCTGGTCAAGTTCCACCTCAACTAGCTCCTCTGAGACTCACAAATCTTAATTTATCTTCAAATTATTTGACAGGAAGGATTCCGAGCGATTTCGAAAACCTTGTGTATGCCACAAGCTTTCTGAATAATTCGGGTCTATGTGTTGATACCTTGGTACTAAACCTTACTTTGTGTAATTCTAGTCCTAAAAGGAGAACAAGTGATTCATCAAAATCACTTACAATGATCATAATCCTTGTGATATTAGCTTCTTTAACCGCTCTCTTGTCGATACTCTTGATGGTGAGATTTTACAGAAAAAGAAAGCAAGATCTGAAAAGGTCATGGAAGCTTACTTCCTTTCAGAGGCTGAGTTTCACAAAATCAAACATTGTGTCGTCGATGAAAGAAAATAATATCATTGGTAGTGGTGGATTTGGCGCTGTGTATCGTGTCGCTGTCGATGGTTTAGGCTATGTTGCAGTGAAAAAGATTTGGGGTAGCAGCAGAAAGTTAGAGCAGAAGCTTGTGGATTCATTTCTTGCAGAAGTTGAAATACTGAGCAATATTCGGCATAACAACATTGTGAAGTTGATGTGTTGTATCTCAAGTGATGATTCTCTACTACTTGTATATGAGTATATGGAAAATCAAAGCCTCGATAGGTGGCTGCACAAGAAAAGTCAGCTGCTATCATCCACTGTGTCGGGTACAGTCCATCATAACAACATCATCGATTGGCCGAAGAGATTGCATATAGCCATTGGAGCTGCACAAGGTTTGTGCTACATGCACAACGATTGCTCTCCACCTATTGTTCATCGAGACGTGAAAACAAGTAACATTCTTTTGGATTCTCAATTCAATGCAAAAGTTGCGGATTTCGGTCTGGCCAAGATATTGATCAAGCCGGAAGAACTTGCCACCATGTCAGCTGTGGCTGGAACATTTGGCTATATTGCTCCAGGTGAAAACAAGAATCAAAATAAGTACTTACTTTGGACTTATAATATTAACAAAAAGAATATGCTCAAACGATACGAGTCAATGAGAAGATAG 2727 0.3557 MTKESTQSYIKLQIFILFFTYANSQTQLLYDQEHETLMKIKNYFHNPFFLSHWTSSNSSHCSWPEIICKNDSITSLSMINTNITQTLPIFLCDLKNLTHIDFQLNYIPKEFPKSLYNCSKLEYLDLSMNFFVGKIPDDIDRLSNLRHLSLGGNNFSGDIPMSIGKLKKLKSLELYQCQFNGTISDEIGNLVDLETLKMFSNSMLPNTTKFPSSITKLKKLRVFHMYDSNLFGEIPETIGEMMDLEYLDLSGNFLSGKIPNGLFSLKNLSILYLYKNNLSGEIPEVVEASELTVFDLSMNNLTGKIPDDFGKLEKLNYFCLFMNQLSGEVPESIGRLPALTDFIVFQNNLSGTFSQDFGRYSKLETFQVASNSFTGNLPHNLCYHGKFVGLTAYDNSLSGELPKSLGSCSSLQYLRVENNEFSGNIPNGLWTSMNLSAIMLSENKFTGELPERLSRKLSTVAVSYNRFSGRIPDGVSSWKNVVKFNASHNFFNGSIPLNLTSLPQLTTLLLDHNQFTGSLPSDIISWKSLVTLNLSNNQLSGDIPDAICQLPALNILDLSENKISGQVPPQLAPLRLTNLNLSSNYLTGRIPSDFENLVYATSFLNNSGLCVDTLVLNLTLCNSSPKRRTSDSSKSLTMIIILVILASLTALLSILLMVRFYRKRKQDLKRSWKLTSFQRLSFTKSNIVSSMKENNIIGSGGFGAVYRVAVDGLGYVAVKKIWGSSRKLEQKLVDSFLAEVEILSNIRHNNIVKLMCCISSDDSLLLVYEYMENQSLDRWLHKKSQLLSSTVSGTVHHNNIIDWPKRLHIAIGAAQGLCYMHNDCSPPIVHRDVKTSNILLDSQFNAKVADFGLAKILIKPEELATMSAVAGTFGYIAPGENKNQNKYLLWTYNINKKNMLKRYESMRR 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01803 908 SUPERFAMILY RNI-like 289 601 - -
Car08g01803 908 Pfam Protein kinase domain 693 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01803 908 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Car08g01803 908 SMART LRR_typ_2 241 265 IPR003591 -
Car08g01803 908 SMART LRR_typ_2 550 574 IPR003591 -
Car08g01803 908 SMART LRR_typ_2 142 166 IPR003591 -
Car08g01803 908 SMART LRR_typ_2 502 526 IPR003591 -
Car08g01803 908 Gene3D Ribonuclease Inhibitor 141 205 IPR032675 -
Car08g01803 908 ProSiteProfiles Protein kinase domain profile. 691 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01803 908 SMART serkin_6 691 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01803 908 SUPERFAMILY Protein kinase-like (PK-like) 684 880 IPR011009 -
Car08g01803 908 Gene3D Ribonuclease Inhibitor 206 339 IPR032675 -
Car08g01803 908 SUPERFAMILY L domain-like 34 285 - -
Car08g01803 908 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Car08g01803 908 Pfam Leucine Rich Repeat 244 263 IPR001611 GO:0005515
Car08g01803 908 Pfam Leucine rich repeat 528 586 IPR001611 GO:0005515
Car08g01803 908 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Car08g01803 908 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Car08g01803 908 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 879 - -
Car08g01803 908 Gene3D Ribonuclease Inhibitor 340 621 IPR032675 -
Car08g01803 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Car08g01803 908 Gene3D Transferase(Phosphotransferase) domain 1 676 889 - -
Car08g01803 908 ProSiteProfiles Leucine-rich repeat profile. 528 550 IPR001611 GO:0005515
Car08g01803 908 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01803 Car-Chr8 28031063 28034932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01803 33 878 Receptor kinase-like Gene Family AT5G25930 50.294 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car08g01803 Pkinase 5.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01803 - - gmx:100785907 1254.2