Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01802 ATGAAAAAATCAAATCTTTTTTCATTTCACTATCTTCTAACAATTTTTCTCATCATTCTAATTCATGCAAAATCTCAATCTCATTACAATCTTCATGATGAAGAACATGAAACCCTAATGAAGTTAAAACAACACTTTGAAAATCCATCAAAACTAACTCATTGGATTTCATCAAACACTTCTCATTGTTCTTGGCAAGAAATCATTTGCACCAATGGTTCAATCACACAACTAAATCTTTTTGACACCAACATAAATCAAACCATACCACCTTTCATATGTGATCTCAAAAACCTAACACATGTTGATTTCAACAACAATTTCATACCTGGAATGTTCCCAACATATCTCAACAACTGTTCAAAATTGGAGTATCTTGATTTGTCAATGAACAATTTTATTGGTAAAATTCCTGATGAAATTTTCACTTTTTCTAATTTGAAGTATCTTAATCTTAGTTACAATAATTTAACTGATGATATTCCTAAAAGTATTGGAAGGATGAAAGAATTGAGGTTTCTTGCACTTCAAGCTTGTTTATTTAATGGAACTTACCCTGATGAGATTGGAAACTTGTTGAATCTTGAAACATTGGATTTGTCATCAAATTCAATGTTTTTGCCTTCTAAGTTGCCAATGAATTGGACCAAATTGAGTAAATTGAAGGTGTTTTATATGTATGACTGCAATCTGTTTGGTGAAATGCCTGAACCAATGGGAAAAATGGCTTCTTTGGAGAAACTTGATGTTTCACAAAATGGTTTAACTGGAAAAATTCCTAGTGGTTTGTTCATGCTGAAAAATCTTTCCATATTGTTTCTTTCGAGAAACAATCTTTCTGGAGAGATACCTAGTTTGGTTGAAGCGTTGAATTTGACTATCATTGATCTTACGAGGAACCGTCTTACAGGAAAAATTCCAGATGATTTTGGAAAGCTGCAAAAGTTAACAGGCTTAGCTTTATCTATGAATAACTTGTCAGGCAAGATACCACAAAGCATAGGTAACCTTCCATCTTTGATAGATTTTAAGGTCTTTATGAACAATTTGTCAGGTACTCTTCCTTCTAATTTTGGTCTTTACTCAAAGCTAGGAACTTTTCTTATTTCTTCAAACAGTTTTAGTGGAAGGTTACCTGAAAATTTGTGCTATCACGGTGAGTTACTTAATTTAGCTGTTTATGAAAATCACTTAAGTGGTGAGTTGCCAGAATCACTTGGAAATTGTAGCAGCCTTGTGAAGCTGAAAGTTTACAATAATGAATTTTATGGCAAAATTCCTAGTGGTCTTTGGAATATTAATTTGGTGGACTTCATGGTAAGTCATAATAAGTTCACTGGTGAGCTACCTCAAAATTTGTCTTCAAGTATTACACTTTTTGACATAAGTTACAATCAGTTTTATGGTGAAATTCCAAATGGTGTATCTTCTTGGACTAATGTTGTTGAGTTTATAGCTAGCAAAAATTTTCTTAATGGAAGTATTCCTCAAGAGCTAACAAATCTTTTTAAGCTAGAAAAATTGTTGCTTGATCAAAATCAGCTCAAAGGGTCACTTCCATTTGATGTAACATCATGGAAGTCCTTAGTGTTTCTAAATTTGAGCCAAAACCAACTCAATGGAGAAATACCGGTTTCTATTGGTCATTTACCTTCCCTTGGTGTTCTTGATGTTTCAGAAAATCAATTCTCTGGTCAAATACCTTCTGTACTTCCTAGAATCACAGTTCTCAATCTATCATCCAATCATTTGACAGGTAGAGTTCCTAGTGAATTTGAAAATTCAGCATATGATAGAAGTTTTTTGAACAATTCTGGTCTATGTGCTGATACAGAAGAACTTAGCCTTACTCTTTGCAATTCTAAAACTCAAGGTCAAAGCAAAGACTCGTCTTTATCTCCTACTTTGATTATAATCTTAGTGGTAGTTTCTACTTTAGTTGTTTTGTTGATATCATTCATTATTATCAAAATTTACGGTAAAAGAAAGCGAGGTTCGGATGATTACTCATGGAAACTCACTTCATTTCAAAGGCTAAATTTCACAGAATCAGATATAGTATCTTCAATGACAGAAAATAATGTTATTGGAAGTGGTGGATATGGAAAAGTTTATAGAGTTGCTGTTGATGGATTAGGCTATATAGCTGTGAAAAAAATTTGGGAAAAAAAAAAACTAGACCATAATCTTGAGAAGTCATTTCACACCGAGGTTAAAATATTGAGCAGCATTCGACATCGAAACATTGTTAAATTATTATGTTGCATCTCTAATGAGGATACAATGCTTCTTGTGTATGAATATGTCGAAAACCGTAGCCTTGATAGATGGCTGCACAAGAAGAGTATGAAATCTTCAAATGTTTCAAGTTCAGTTCATCATGTTGTTCTTGATTGGACAAAGAGATTGCAAATAGCTATTGGGATAGCTCAAGGTTTGAGCTACATGCATCATGAATGTTCACCACCTGTTGTTCATAGAGATGTGAAGACAAGTAACATACTTTTGGATTCTCAGTTCAATGCAAAAGTTGCTGATTTTGGTCTTGCTAGGATGTTGATCAAGCCTGGTGAACTTGCTACCATGTCAGCTGTCATTGGATCATTTGGCTATATGGCTCCAGAATATGTTCAAACGACTCGAGTTAGTGAAAAGATTGACGTGTTCAGCTTTGGTGTTATCCTATTGGAACTAACAACCGGTAAAGAAGCTAATTATGGCGACGAGCATTCATCTCTTGCAGAATGGTCATGGTGCCACATTCAAGCAGGAAGCAATATAGAAGAGTTGCTTGACAAAGAAGTAATGGAATCAAGTCACTTGAATGGAATGTGTAAAGTTTTCAAACTTGGTGTTATGTGTACTTCAACACTTCCATCAAGTAGACCTTCCATGAAAGAGGTTTTGGAAGTATTGCTCAATTGTGGAGAATTGTTTGCTTATGGAGAGAGGAATATTGTTGGTCATAATGTTAATGATGGTGTTCCACTTCTTAGAAATTCAAAAAGAGAGTGTAAGTTAGATATTGATGATAATGATAGCTAG 3045 0.3396 MKKSNLFSFHYLLTIFLIILIHAKSQSHYNLHDEEHETLMKLKQHFENPSKLTHWISSNTSHCSWQEIICTNGSITQLNLFDTNINQTIPPFICDLKNLTHVDFNNNFIPGMFPTYLNNCSKLEYLDLSMNNFIGKIPDEIFTFSNLKYLNLSYNNLTDDIPKSIGRMKELRFLALQACLFNGTYPDEIGNLLNLETLDLSSNSMFLPSKLPMNWTKLSKLKVFYMYDCNLFGEMPEPMGKMASLEKLDVSQNGLTGKIPSGLFMLKNLSILFLSRNNLSGEIPSLVEALNLTIIDLTRNRLTGKIPDDFGKLQKLTGLALSMNNLSGKIPQSIGNLPSLIDFKVFMNNLSGTLPSNFGLYSKLGTFLISSNSFSGRLPENLCYHGELLNLAVYENHLSGELPESLGNCSSLVKLKVYNNEFYGKIPSGLWNINLVDFMVSHNKFTGELPQNLSSSITLFDISYNQFYGEIPNGVSSWTNVVEFIASKNFLNGSIPQELTNLFKLEKLLLDQNQLKGSLPFDVTSWKSLVFLNLSQNQLNGEIPVSIGHLPSLGVLDVSENQFSGQIPSVLPRITVLNLSSNHLTGRVPSEFENSAYDRSFLNNSGLCADTEELSLTLCNSKTQGQSKDSSLSPTLIIILVVVSTLVVLLISFIIIKIYGKRKRGSDDYSWKLTSFQRLNFTESDIVSSMTENNVIGSGGYGKVYRVAVDGLGYIAVKKIWEKKKLDHNLEKSFHTEVKILSSIRHRNIVKLLCCISNEDTMLLVYEYVENRSLDRWLHKKSMKSSNVSSSVHHVVLDWTKRLQIAIGIAQGLSYMHHECSPPVVHRDVKTSNILLDSQFNAKVADFGLARMLIKPGELATMSAVIGSFGYMAPEYVQTTRVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWSWCHIQAGSNIEELLDKEVMESSHLNGMCKVFKLGVMCTSTLPSSRPSMKEVLEVLLNCGELFAYGERNIVGHNVNDGVPLLRNSKRECKLDIDDNDS 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01802 1014 Gene3D Transferase(Phosphotransferase) domain 1 769 981 - -
Car08g01802 1014 Gene3D Phosphorylase Kinase; domain 1 668 768 - -
Car08g01802 1014 SUPERFAMILY L domain-like 43 351 - -
Car08g01802 1014 Pfam Leucine Rich Repeat 291 313 IPR001611 GO:0005515
Car08g01802 1014 Gene3D Ribonuclease Inhibitor 189 287 IPR032675 -
Car08g01802 1014 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Car08g01802 1014 Gene3D Ribonuclease Inhibitor 478 615 IPR032675 -
Car08g01802 1014 Pfam Leucine rich repeat 122 179 IPR001611 GO:0005515
Car08g01802 1014 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 1006 - -
Car08g01802 1014 ProSiteProfiles Leucine-rich repeat profile. 122 144 IPR001611 GO:0005515
Car08g01802 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 972 IPR011009 -
Car08g01802 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 1006 - -
Car08g01802 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Car08g01802 1014 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
Car08g01802 1014 SMART serkin_6 690 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01802 1014 Pfam Protein kinase domain 692 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01802 1014 Gene3D Ribonuclease Inhibitor 33 139 IPR032675 -
Car08g01802 1014 Gene3D Ribonuclease Inhibitor 140 188 IPR032675 -
Car08g01802 1014 SMART LRR_typ_2 313 337 IPR003591 -
Car08g01802 1014 SMART LRR_typ_2 192 214 IPR003591 -
Car08g01802 1014 SMART LRR_typ_2 502 526 IPR003591 -
Car08g01802 1014 SMART LRR_typ_2 571 594 IPR003591 -
Car08g01802 1014 SMART LRR_typ_2 242 266 IPR003591 -
Car08g01802 1014 SMART LRR_typ_2 144 168 IPR003591 -
Car08g01802 1014 CDD STKc_IRAK 696 972 - -
Car08g01802 1014 Gene3D Ribonuclease Inhibitor 383 477 IPR032675 -
Car08g01802 1014 Gene3D Ribonuclease Inhibitor 288 382 IPR032675 -
Car08g01802 1014 SUPERFAMILY RNI-like 286 594 - -
Car08g01802 1014 ProSiteProfiles Protein kinase domain profile. 690 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01802 1014 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01802 Car-Chr8 28024223 28028208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01802 35 976 Receptor kinase-like Gene Family AT5G25930 50.053 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car08g01802 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01802 - - cam:101515509 1954.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01802 08 28024223 28028208 Car08g01802 08 28024223 28028208 ECH