Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01792 ATGTCAAAATATGATTACATTTTCAGCATGTTGGTAGTTCTTATTCTTGTTGTGCAAAATCTTAAAACAATACAATGTCATACAAAGGGAATTAGACCAATAAGTTCTTCTTCAGGGAACAATACAACAAGAACAGAGTTAACAGAACAACAATTCATGAAATGGGTGAGTTTTGTTGGTGGTCTCAAACACACAGTTTTCAAGGCTGCAAAAAATAAGCTCTTTGCTTCTTACACTTTGCACGTTGATAAGGATCCTTCTATTGGAGATTTCACCACTATTCAAGAAGCCATTGATTCCCTTCCATCCATCAATCTTGTTAGAGTTGTCATCAAAGTTCATGCAGGTGTTTACATGGAGAAAGTGAACATTCCTCCATTAAAATCATTCATAACCATAGAAGGAGATGATGCAGATACAACAATTGTTCAATGGGGTGACACTGCTCAAACACCTGGTCCAAAAGGGACTCCAATGGGAACACATGGTTCAGCAACTTTTGCAGTTAATTCACCTTATTTCATTGCTAAGAACATTACATTCCAAAATACTTTTCCTGTTCCTGCACCAGGAGCAATGGGAAAACAGGCAGTGGCATTTAGAATATCAGCAGACACAGCATCATTTTTAGGATGCAAATTTTTAGGAGCACAAGATACACTTTATGATCATGTTGGTAGACATTACTATAAGGATTGTTACATTGAAGGTTCTGGATGTCACGTGCATGCAATAGCAAGAAATGCAGGGGCAGTAACAGCACAAGGAAGAAGCAATGAATTGGAAGACACAGGATTTTCATTTGTGAATTGTAAGGTGACAGGTTCAGGAGCATTATACCTAGGAAGAGCTTGGGGTCGTTATTCTCGTGTAGTCTTTGCTTATACATATATGGATAATATCATCATTCCTAAGGGATGGTATAATTGGGGTGATCCTAATCGTGAAATGACTGTATTCTATGGACAATACAAATGCAGAGGAGATGGAGCAAACTTTGCAGGAAGAGTATCATGGTCAAGAGAATTAACTGATGATCAAGCTAAACCTTTTCTTTCACTTTCTTTTATTGATGGCACTGAATGGATCAATTTTTAG 1098 0.3743 MSKYDYIFSMLVVLILVVQNLKTIQCHTKGIRPISSSSGNNTTRTELTEQQFMKWVSFVGGLKHTVFKAAKNKLFASYTLHVDKDPSIGDFTTIQEAIDSLPSINLVRVVIKVHAGVYMEKVNIPPLKSFITIEGDDADTTIVQWGDTAQTPGPKGTPMGTHGSATFAVNSPYFIAKNITFQNTFPVPAPGAMGKQAVAFRISADTASFLGCKFLGAQDTLYDHVGRHYYKDCYIEGSGCHVHAIARNAGAVTAQGRSNELEDTGFSFVNCKVTGSGALYLGRAWGRYSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCRGDGANFAGRVSWSRELTDDQAKPFLSLSFIDGTEWINF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01792 365 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 364 - -
Car08g01792 365 Gene3D - 75 365 IPR012334 -
Car08g01792 365 PANTHER PECTINESTERASE 8 364 - -
Car08g01792 365 Pfam Pectinesterase 88 359 IPR000070 GO:0030599|GO:0042545
Car08g01792 365 SUPERFAMILY Pectin lyase-like 76 364 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01792 Car-Chr8 27919711 27923537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01792 5 363 Carbohydrate Esterase AT5G47500 39.678 3.50e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01792 K01051 - gmx:100817924 605.134