Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01781 ATGGGTTGCATTTATTCACGTGTTTGCATCGGTGAAACTTGCAAAGGTTCAAGCATCAATGGTGACCAAATTTCATCGCAACAATTTCACGAAATCAACAATTTATCAACAAATTCTTCATCAGAACTTCACCAAATGGAAATTGGTGATCAATTTAATCAATTAAACTCAACAAGAGATTCAGAAGCTGGAATTCGTAGATTAGCTAGGGTTTCATCTCAGTTTCTTCCACCAGATGGTTCAAGAATAGTGAAAATTCCTTCAAATGAGTATGAATTGCGGTATTCTTATCTTTCTCAACGTGGTTATTACCCTGATGCACTTGATAAAGCGAATCAAGATAGTTTTTGTATTCATACGCCATTTGGAACTGATCCTAATGATCATTTTTTCGGTGTTTTTGATGGTCATGGTGAATTTGGAGCGCAATGTTCGCAGTTTGTTAAGAGGAAGCTTTGTGAGAATCTATTGAGGAATTCTAGGTTTGGTGTTGATGCTGTAGAGGCTTGTCATTCGGCTTTTTTAGCGACGAATTCGATGTTACATGGTGATGTTTTAGATGATAGTATGAGTGGAACAACTGCTATAACTGTTTTGGTTAGAGGGAAAACTGTTTATGTAGCGAATTGTGGTGATTCGAGGGCGGTTATAGCCGAGAAAAGAGGAAAAGATGGTGGTGTTTTGGCTGTTGATTTGTCTGTTGATCAGACACCATTTAGGGTTGATGAGTTTGAAAGAGGGAAAGTTTGTGGTGCTAGGGTTCTTACTTTGGATCAAATTGAAGGGTTAAAGAATCCTGATGTTCAATGTTGGGGTAGTGATGAAGAAGGTGATGATGGTGATCCACCTAGGTTGTGGGTCCCAAATGGGATGTATCCTGGTACTGCTTTTACAAGGAGTATTGGTGATTCTATTGCTGAGACTATTGGTGTTGTTGCTAATCCTGAGATTGTTGTTTTTGAACTCACACATAATAATCCATTTTTTGTTATTGCTAGTGATGGTGTTTTTGAGTTTCTTTCTAGCCAAACTGTGGTTGAAATGGTTGCGAAATTCAAAGATCCACGCGATGCTTGTGCTGCGATAGTGGCAGAATCTTATCGACTTTGGCTACAGTATGAGACTCGTACAGATGATATTACAGTCATCATTGTGCATATAAATGGGCTAAATGAACCCGTTGTCGCTCATTCAGCAAGTTATAGCGATGTTATACGAACCACTATCCCTCAAGTCGTAGAGCTGACAGGTTCAGAATCTCCTTCCACATTTGGCTGGAATGCTAGGAATCATCGTGTAAGACAGGAGTTGTCAAGGGCTCGCCTCCGAGCAATTGAAAACTCCCTTGAGAATGGACAAGTTTGGGTTCCTCCACCTTCAGCTCACAGAAAGACGTGGGAGGAAGAAGCACACATAGAGAAGGCATTGCATGATCATTTTCTCTTCCGAAAGCTTACCGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTCCAACCTGGGGATATTATAGTCAAACAGGGCGGAGAAAGTGATTGTTTTTATGTTGTTGGCAACGGAGAATTTGAGGTCTTGGCGACTCAGGAAGAAAAGGATGGGGAGGTACCTAGAGTTTTGCAGCGCTACACAGCCGAAAAACTGTCGTGCTTTGGGGAACTTGCTCTGATGTACAACAAACCACTCCAAGCTTCTGTGCGTGCCGTAACAGAAGGAACACTTTGGACTTTAAAGCGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAATTTGTCATCGTTGAAGTTACTTCGGTCCGTAGATCTCCTCTCAAAATTGTCGATTTTACAACTGAGTCAGATTTCTGACTCCCTTTCCAAAGTTTCCTTCTCAAGTGGACAGACAATAATTGATAAAAATGAAGTCCTTGCATTGTACATTATCCAGAAGGGACGTGTAAAAATAACGTTTGACACCACTTTATTGACAAGTCCAAATACCTACAGCCTCAAGTCTGACATCGAAAATGAGGATGACGATTTACCGAGCAGAACAGAACTGTCAATAGAGAAGCCCGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGACGAACACATTGGTTCCATAACCGCTGTTGCTGTGGATGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCAGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATAACAAGTTGAGTGATAATTCGAAGGAATCGACCGGAAATTTTGAATTCTCATCGCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAATGACAGTATATTCCACTGATTGCTCTGAGATTGGACTTGCAAATTTAAGAGACTCAGAAAATGTGCTTACTTTGCAGAAATTTTCCAAGCCAAAAGTGAAAAGGCTAGGAAAGGAATCACAAGTCTTGAAAGAGAGAGATTTGATTAAGGGTGTGAGCTCTTCAGCTTGTGTACCACAAGTTTTATGCACCTTTGCCGACCGCAGATATGCTGGAATACTGCTAAATACACGCCTTGCCTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTGAGCGAATCAGCAGCCCGATTTTGTGCTGCTTCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTGTATAGAGGTGTCTCACCTGATGTTTTGATGTTGGATCAATCAGGACAGATACAGTTGGTGGACTTCAGATTTGGAAAGAAGCTATCTGACGAGAGAACATTCACAATTTGTGGGATGGCAGATTCGCTCGCTCCAGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCTGCCGACTGGTGGGCATTGGGAGTTTTAGTATATTTTATGATACGGGGCGAAATGCCATTTGGATCATGGAGGGAAAATGAACTTGATACAGTCGCCAAAATTGCGAAAAGGAAACTAAATCTTCCAGACACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGTTACTTGAGGCAGAAGAAAATACTAGAGTTGGTAGCCAAGGTTCTGATTCTGTCAAAAGTCACTCATGGTTTAATGGTATTGATTGGGAAGGAATTAGACATCACACTTTCCCTGTTCCTACCGAAATTATTTCTCGCATAACACAGTACTTGGAAGCTCATTCCGAGGATTATACCGCTTCTATAGGGTCTCCATTACATGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAGGATTGGTAG 3237 0.4109 MGCIYSRVCIGETCKGSSINGDQISSQQFHEINNLSTNSSSELHQMEIGDQFNQLNSTRDSEAGIRRLARVSSQFLPPDGSRIVKIPSNEYELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTDPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSRFGVDAVEACHSAFLATNSMLHGDVLDDSMSGTTAITVLVRGKTVYVANCGDSRAVIAEKRGKDGGVLAVDLSVDQTPFRVDEFERGKVCGARVLTLDQIEGLKNPDVQCWGSDEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTHNNPFFVIASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLNEPVVAHSASYSDVIRTTIPQVVELTGSESPSTFGWNARNHRVRQELSRARLRAIENSLENGQVWVPPPSAHRKTWEEEAHIEKALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGESDCFYVVGNGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWTLKREDFRGILMSEFSNLSSLKLLRSVDLLSKLSILQLSQISDSLSKVSFSSGQTIIDKNEVLALYIIQKGRVKITFDTTLLTSPNTYSLKSDIENEDDDLPSRTELSIEKPEGSYFGEWALLDEHIGSITAVAVDDVVCALLTKDKFESVIGSLQKISQEDNKLSDNSKESTGNFEFSSLDKVQLSDLEWRMTVYSTDCSEIGLANLRDSENVLTLQKFSKPKVKRLGKESQVLKERDLIKGVSSSACVPQVLCTFADRRYAGILLNTRLACPLSSILSSPLSESAARFCAASVVTALEDLHKNGVLYRGVSPDVLMLDQSGQIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLVYFMIRGEMPFGSWRENELDTVAKIAKRKLNLPDTFSPEAVDLISKLLEAEENTRVGSQGSDSVKSHSWFNGIDWEGIRHHTFPVPTEIISRITQYLEAHSEDYTASIGSPLHEVEELNVPEWLEDW 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01781 1078 Pfam Protein phosphatase 2C 123 366 IPR001932 -
Car08g01781 1078 Gene3D Phosphorylase Kinase; domain 1 775 851 - -
Car08g01781 1078 Pfam Cyclic nucleotide-binding domain 500 591 IPR000595 -
Car08g01781 1078 Pfam Cyclic nucleotide-binding domain 626 730 IPR000595 -
Car08g01781 1078 ProSiteProfiles PPM-type phosphatase domain profile. 94 387 IPR001932 -
Car08g01781 1078 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 31 1078 - -
Car08g01781 1078 Gene3D Jelly Rolls 457 596 IPR014710 -
Car08g01781 1078 SMART cnmp_10 607 745 IPR000595 -
Car08g01781 1078 SMART cnmp_10 481 604 IPR000595 -
Car08g01781 1078 SUPERFAMILY cAMP-binding domain-like 446 591 IPR018490 -
Car08g01781 1078 SMART PP2C_4 86 385 IPR001932 -
Car08g01781 1078 Gene3D - 85 388 IPR036457 -
Car08g01781 1078 PRINTS cAMP-dependent protein kinase signature 502 516 - -
Car08g01781 1078 PRINTS cAMP-dependent protein kinase signature 517 531 - -
Car08g01781 1078 PRINTS cAMP-dependent protein kinase signature 552 561 - -
Car08g01781 1078 PRINTS cAMP-dependent protein kinase signature 726 738 - -
Car08g01781 1078 Gene3D Transferase(Phosphotransferase) domain 1 852 1037 - -
Car08g01781 1078 ProSiteProfiles Protein kinase domain profile. 745 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01781 1078 Pfam Protein kinase domain 797 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01781 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 607 731 IPR000595 -
Car08g01781 1078 SUPERFAMILY PP2C-like 82 390 IPR036457 -
Car08g01781 1078 CDD PP2Cc 110 387 IPR001932 -
Car08g01781 1078 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 31 1078 - -
Car08g01781 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 481 590 IPR000595 -
Car08g01781 1078 CDD CAP_ED 607 731 IPR000595 -
Car08g01781 1078 SUPERFAMILY Protein kinase-like (PK-like) 783 1053 IPR011009 -
Car08g01781 1078 SMART serkin_6 775 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01781 1078 Gene3D Jelly Rolls 597 751 IPR014710 -
Car08g01781 1078 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Car08g01781 1078 SUPERFAMILY cAMP-binding domain-like 600 736 IPR018490 -
Car08g01781 1078 CDD CAP_ED 481 590 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01781 Car-Chr8 27777723 27786260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01781 1 1078 PP2C-type Phosphatase Gene Family AT2G20050 67.243 0.0 1467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Car08g01781 PP2C 6e-32 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01781 - - gmx:100799821 1817.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01781 08 27777723 27786260 Car08g01781 08 27777723 27786260 ECH