Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01779 ATGGCTTCTTCATCAATTCGTCCCTCTTTTTCTTCATTCAAGTTACCCTCTCTTTTTCATCTTCGCAGTACCGGTGTTAGATTGCCCCATAATTTTGGCCCGAAAGCATCTAGGTTGTTGAGACATGATAGTAGATGTATGAGAGTGATGTCATCTGGGAACATGTCTCCATATGCTACACAGGAAAATGCGTTAGATTGGGTGAAGCATGACAAGAGAAGAATGCTTCACGTCGTATATCGTGTCGGGGACTTGGACAAGAGCATAAAATTTTATACAGAGTGTCTTGGAATGAAGGTGCTTAGAAAACGTGACATGACGGAGGAGAAATATACTAATGCTTTTCTTGGATATGGCCCGGAGGATGCACATTTTGTTATCGAACTAACATACAATTATGGGATTGACACGTATGACATTGGAACCGGATTCGGCCATTTTGGCGTTGCTATGGATGATATTTCAAGAATTGTGGACATTGTGAGAGCTAAAGGCGGAAAAATCATTAGAGAGCCGGGTCCAGTCAAGGAAGGCAGCTCAACTATTGCGTTTATTGAAGATCCTGATGGTTATAAATTTGAACTTTTGGAAAGGGCTCCGTCGCGTGAACCCCTGTGTAAAGTAATGCTTCGGGTGGGTGATCTTGATCGATCCATAAATTTTTATGAAAAGGCTTTGTGTATGGAGCTGCTTAGAACTCAAGATGATCCAGAATCCAAGTGTACCATTGCAATACTCGGTTATGGTCCAGAAAAAGAAAATACTGTTCTGGAGTTGACTTACAACTATGGAGTCACAGAATATGATAAAGGAGATGCATATGTTCAGGTTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCGATTAAACTTGCCGGAGGAAAAATTACTCGTGAACCTGGACCGGTACCTGGTTACAGAACAAAAATTACATCATGTGTAGATCCCGATGGTTGGAAGACGGTTTTTGTAGATAATCATGATTTTCGTAAGGAGGTTGAGTAG 1011 0.4135 MASSSIRPSFSSFKLPSLFHLRSTGVRLPHNFGPKASRLLRHDSRCMRVMSSGNMSPYATQENALDWVKHDKRRMLHVVYRVGDLDKSIKFYTECLGMKVLRKRDMTEEKYTNAFLGYGPEDAHFVIELTYNYGIDTYDIGTGFGHFGVAMDDISRIVDIVRAKGGKIIREPGPVKEGSSTIAFIEDPDGYKFELLERAPSREPLCKVMLRVGDLDRSINFYEKALCMELLRTQDDPESKCTIAILGYGPEKENTVLELTYNYGVTEYDKGDAYVQVAIGTDDVYKTAEAIKLAGGKITREPGPVPGYRTKITSCVDPDGWKTVFVDNHDFRKEVE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01779 336 Gene3D - 201 336 IPR029068 -
Car08g01779 336 CDD GlxI_Ni 75 196 - -
Car08g01779 336 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 208 322 IPR004360 -
Car08g01779 336 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 75 195 IPR004360 -
Car08g01779 336 Gene3D - 46 200 IPR029068 -
Car08g01779 336 ProSitePatterns Glyoxalase I signature 2. 141 153 IPR018146 GO:0004462|GO:0046872
Car08g01779 336 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 206 328 IPR029068 -
Car08g01779 336 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 74 198 IPR037523 -
Car08g01779 336 ProSitePatterns Glyoxalase I signature 1. 77 98 IPR018146 GO:0004462|GO:0046872
Car08g01779 336 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 204 328 IPR037523 -
Car08g01779 336 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 14 336 - -
Car08g01779 336 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 74 200 IPR029068 -
Car08g01779 336 TIGRFAM glyox_I: lactoylglutathione lyase 205 333 IPR004361 GO:0004462|GO:0046872
Car08g01779 336 TIGRFAM glyox_I: lactoylglutathione lyase 62 206 IPR004361 GO:0004462|GO:0046872
Car08g01779 336 PANTHER LACTOYLGLUTATHIONE LYASE 14 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01779 Car-Chr8 27752272 27756123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01779 205 325 Calmodulin-binding Proteins AT1G08110 27.891 6.92e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01779 K01759 - gmx:100781439 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01779 08 27752272 27756123 Car08g01779 08 27752272 27756123 ECH
Car06g00319 06 3424362 3428066 Car08g01779 08 27752272 27756123 PCT