Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01771 ATGATTAAAATAAATCCCGTACCTAAGGAAAAGCCATGTATTATTTTAAAAGGATCAGGAAGCAACACCACAACCATTACTTATTACGATTCATTTCATAATAAGGGTACATCTTTGAGTGCTACATTCATTTCATCTCCACCTAATATTGTTGTGAGTGGCATTACATTCAAGAACACATTTGGAACGGATGGACCTGCAGTTGCAGCTAATTTTTATGGTGATAAATCTGCTATCTTCGATTCTAGTTTCATGGGTTATCAAGATACATTACTTATATCACTAGGACGCTCTTACTTTAAAAATTGTTATATTGAAGGAGAAGTTGATTTTATTTTTGGTTCAGGCCAAACTTATTTTGAGAATAGTTTGATAAATGCCACACAACGACACAAAAGACCACCTGGTTATGTGACAGCACACAGAAGAAATTCACCAAATGATCCAAATGGTTTTGTTTTTAGAGGAGGGTCCCTTGTTGGAACAGGTAAAGTACATCTTGGAAGACCTTGGGGCGTTTATGCAAGAGTTATATTTTGGGAAACATACTTTTCTTCAGTGGTAGCTCCTCGAGGATGGAATATTTGGGATTTAAAACATGGACAAGAATTAAATGTCGTCTTCGCAGAAGTTAATTGTACAGGACCAGGTTCTAATACTAAGAACCGTGTCAGGTGGGAGAAGAAGCCAAGTTACTTAAACATGAATGATTATACTTTATCATCTTTCGTAAATTATGATGGATGGCTTGATCAAATACCATCTATAATGTAG 774 0.3566 MIKINPVPKEKPCIILKGSGSNTTTITYYDSFHNKGTSLSATFISSPPNIVVSGITFKNTFGTDGPAVAANFYGDKSAIFDSSFMGYQDTLLISLGRSYFKNCYIEGEVDFIFGSGQTYFENSLINATQRHKRPPGYVTAHRRNSPNDPNGFVFRGGSLVGTGKVHLGRPWGVYARVIFWETYFSSVVAPRGWNIWDLKHGQELNVVFAEVNCTGPGSNTKNRVRWEKKPSYLNMNDYTLSSFVNYDGWLDQIPSIM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01771 257 Pfam Pectinesterase 7 245 IPR000070 GO:0030599|GO:0042545
Car08g01771 257 SUPERFAMILY Pectin lyase-like 7 252 IPR011050 -
Car08g01771 257 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 256 - -
Car08g01771 257 Gene3D - 4 256 IPR012334 -
Car08g01771 257 PANTHER PECTINESTERASE 7 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01771 Car-Chr8 27665416 27667031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01771 7 203 Carbohydrate Esterase AT2G19150 44.928 1.27e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01771 - - mtr:MTR_5g088290 322.398