Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01769 ATGAATAGAGGTGTTGTTCAAAGTTCACCAGTGCAACAAATGATGGCTAGTAACCCTAATTGGTGGAATATCAATATCAATAACATGAGGCCTCCATCTCCACAAGCTTCTCCTTTTTTTTCAACTCCTTCTAACTTTCTCAACCCTTTTACACCAActtcttcttcttcttctcttccttttccttcttGGCATGACAATCATCAAGAGCTTCCTGAATCATGGAGCCAACTACTCATGGGTGGACTTGTGGGTGAGGAAGATAAAATTGGTATGAGCCAATTTCATAATCAAATGTTAATAAGTCAAGCTCCAAATGCTTCTCTTGTTGATGTTAAACAAGAAAGTTCAAGAAATAGCTATGTATATGGACATGGAAATGAAGAACTTAATTCAACAAAATCTTCTTGGTCTCCAAATTCAAGTGTGACAAGTTTCAACAACAACATGTTAGATTTCTCTAACAATAATGATGTTAGGCATCCATCACAAGATCGATCTTCTGAGTGCAATAGCACTGCATCCGGTGGGGCAATGAAGAAAGCTAGGGTTCAACAAACTACAACTCAATCAACTTTCAAGGTTAGAAAGGAGAAGTTAGGTGATAGAATTACTGCCCTTCATCAGCTTGTTTCCCCATTTGGAAAGACTGACACAGCCTCTGTCCTGTTAGAAGCTATTGGTTATATCAGATTCCTTCATAATCAAATTGAGGCTCTTAGCGTACCATACTTGAGCAATGGATCAGGAAACACAAGGCAACAACATTCGGTTCAAGGAGAGAAGAATTGTTTATTCCCTGAAGACCCTGGTCAGCTGCTAAATGAATATAGCTTGAAGAGGAAAGCAGCTGAAGAGGGTTCTCAAGATCAAGAATCAAAGAAGGACCTAAGGAGTAGAGGGTTGTGTCTTGTTCCAGTATCATGCACCATACAAGTTGGCAATGACAATGGAGCTGATTATTGGGCACCTACCCTTGGAGGGGGATTTAGGTAG 996 0.3865 MNRGVVQSSPVQQMMASNPNWWNININNMRPPSPQASPFFSTPSNFLNPFTPTSSSSSLPFPSWHDNHQELPESWSQLLMGGLVGEEDKIGMSQFHNQMLISQAPNASLVDVKQESSRNSYVYGHGNEELNSTKSSWSPNSSVTSFNNNMLDFSNNNDVRHPSQDRSSECNSTASGGAMKKARVQQTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHNQIEALSVPYLSNGSGNTRQQHSVQGEKNCLFPEDPGQLLNEYSLKRKAAEEGSQDQESKKDLRSRGLCLVPVSCTIQVGNDNGADYWAPTLGGGFR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01769 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 245 IPR036638 GO:0046983
Car08g01769 331 Gene3D - 185 246 IPR036638 GO:0046983
Car08g01769 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 317 - -
Car08g01769 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Car08g01769 331 MobiDBLite consensus disorder prediction 155 192 - -
Car08g01769 331 CDD bHLH_AtbHLH_like 192 241 IPR045239 -
Car08g01769 331 PANTHER OS05G0228400 PROTEIN 17 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01769 Car-Chr8 27638421 27644914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01769 1 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.143 1.91e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01769 - - gmx:100786555 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01769 08 27638421 27644914 Car08g01769 08 27638421 27644914 ECH
Car06g00308 06 3342027 3345837 Car08g01769 08 27638421 27644914 PCT