Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01764 ATGGATCCTCCAACAAAGAGTTGGAGCATCCATACCCGACCCGAAATAACAACCAAATACGAAATCCTCGAACTAATCGGATCCGGATCTTACGCCGACGTATACCGTGGACGGCGAACCTCCGATGGAATCACGGTGGCGCTAAAGGAAATCCACGATCACCAATCAGCCTCACGAGAAATCGACGCGTTACGGATTCTTCGGGGATCCGAAAACGTCGTTTTCATGCACGAGTTCTTCTGGCGTGAAGACGAAGACGCAGTTCTCGTTCTCGAGTTTCTGAGGACTGATCTCGCCGCCGTGATTAAGGAGGTTTCCGGTGCCGGAGAAGGTGAGGGTTTTTCCGTTGGAGAAGTTAAGAGATGGATGAAGATGATAGTTAGTGGGGTCCACTGTTGTCATGTGAATAGGATTGTGCATAGAGATTTGAAGCCTCAGAATTTTTTGGTTTCTGATGATGGGGTTCTTAAGTTGGCTGATTTTGGACAGGCAAGGATACTTATGGAGTCAGGAtttgatgcatcaaatcatgcaagttcatcccaacatccTCATGATGCTATTTCCTTATCACACTACTCAAACCAAATTGAATTTGGAAATCAAGAAGATGACGAGGAAAAAATTAGTCATGATGAATATTTTAGAGTATTAGATGAGCTGAAAATTCAGAGTCACACATATGACACTGATGATAAGGACACCAACACACATGATGGTAATACATCATGCCTTGCAACATGCACAACTACtgatgatgatgaagatgattatCTTTGGAAGAATTCTTTGCCATATGAAGGAGATGAAGAAGGAGGGAATGAACTTGGTTTTCTCACATCATGTGTTGGAACAAGATGGTATAGGGCACCTGAACTTCTTTTCGGTTCCACTAACTATGGTTTAGAGGTTGATCTTTGGTCATTAGGATGTGTCTTTGCTGAGTTGTTTACATTGAAGCCTTTGTTTCAAGGAACAACTGATATAGATCAAATTAGTAGAATCATTAGTGTTTTGGGTGACATCAATGAGGATGTTTGGCATGGTTGTTCTAAACTTCCTGATTATGCAGCAATTTCATTTAATAAGGTGGAAAACCCTATTGGTCTTGAAGGGTGCATGGTGAACCAATTGGATGATGAAGTTTCCTTTGTTAGAAGATTGGTTTGTTATGATCCTGCTAGGAGAGCCACTGCAATGGAGTTACTTCATGAAAAGTACTTCTGTGAAGAACCACTTCCTGTTCCTGTTTCTCAGTTGCGGATTCCTGTAACAAAAAATGAATAA 1287 0.4002 MDPPTKSWSIHTRPEITTKYEILELIGSGSYADVYRGRRTSDGITVALKEIHDHQSASREIDALRILRGSENVVFMHEFFWREDEDAVLVLEFLRTDLAAVIKEVSGAGEGEGFSVGEVKRWMKMIVSGVHCCHVNRIVHRDLKPQNFLVSDDGVLKLADFGQARILMESGFDASNHASSSQHPHDAISLSHYSNQIEFGNQEDDEEKISHDEYFRVLDELKIQSHTYDTDDKDTNTHDGNTSCLATCTTTDDDEDDYLWKNSLPYEGDEEGGNELGFLTSCVGTRWYRAPELLFGSTNYGLEVDLWSLGCVFAELFTLKPLFQGTTDIDQISRIISVLGDINEDVWHGCSKLPDYAAISFNKVENPIGLEGCMVNQLDDEVSFVRRLVCYDPARRATAMELLHEKYFCEEPLPVPVSQLRIPVTKNE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01764 428 Gene3D Transferase(Phosphotransferase) domain 1 108 414 - -
Car08g01764 428 ProSiteProfiles Protein kinase domain profile. 20 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01764 428 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Car08g01764 428 PANTHER CYCLIN-DEPENDENT KINASE 10 18 415 - -
Car08g01764 428 SMART serkin_6 20 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01764 428 PANTHER CELL DIVISION PROTEIN KINASE 18 415 - -
Car08g01764 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Car08g01764 428 Pfam Protein kinase domain 20 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01764 428 Pfam Protein kinase domain 279 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01764 428 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Car08g01764 428 SUPERFAMILY Protein kinase-like (PK-like) 4 420 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01764 Car-Chr8 27605869 27608259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01764 4 425 Core Cell Cycle Gene Families AT4G28980 60.321 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Car08g01764 Pkinase 2.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01764 - - gmx:548056 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01764 08 27605869 27608259 Car08g01764 08 27605869 27608259 ECH
Car06g00305 06 3322577 3325293 Car08g01764 08 27605869 27608259 PCT