Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01751 ATGGCGGAAGGTGAAGGTGGAGATTGTGGTATGAAGAATGTACCGTCTCCGGCGGCGTTGGAATTTGTTGTTTCTGCTTCGCCGACGGCGGCTACGACGGCGTGGTTGGATGCTCCAGCGAAGAAGCTTGCGAGGCAGCTTGATTTTAATGCTATGATGGAACAGTCGAAGCCGCAGCTTCAGACGCCGAGTTTGATGTTGCAGAAACAGGTGTCTGGTTCGCCTTTGCCACATCAGACACTTCATGGTTCTGTCAGGGTTGGGAAACCAGAATCTCCCAAACCAAGATCAAGACCTAACTTTGACATGAAAGAAGGTACACCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAATTATACTGTGAATGTTTTGCGTCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTCAACAATGTTGATAATGAAGCTGCTAGGCGAGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCGAGCAGCCCTCAAGGAACACGTGCTAGCAGTGAGGAGGCTGGGGAAGGTGTAATATTAGTAAAACATAACAAGGGTTGCCATTGTAAAAAATCTGGCTGCCTTAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTCTGTTCTGAGAATTGTAAATGCATGGACTGCAAGAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGTAGatcaaaatcaaaatcaaaatcaaaatAACCACACGTATATTCAGCAAGCGGCAAATGCTGCCATAACTGGAGCTATTGGTTCGTACGGCTTTTCATCACCACCAGTATCAAAGAAAAGAAAAGGTCAGGAACTCTTCTTGTGGCCTACAGCTAAGGACCCATCAATAAGCAAGTCGGGCCAACAGGTAAACCATGTCAAAGCCCCAGCACCCTCTTCAGCATTGTCACCTGCCTCAAGTGCTCGTGTTGGCAATGCAACATTAGGTCATAGTCCATCAAAATTAAAGTACAGGTCTCTTCTAGCAGACGTTATACAACCACACCACCTCAAGGAGCTTTGTTCCGTTCTAGTGCTAGTATCTGGACAAGCTGCAAAAACACGTGCAGACCAGAAAAATTTAATGGAAAAGCATACAGAAGATCAGACGGAAACTTCCCTTGCTTCTTCAACTGAAGGACAATTACCAACTCAAAAGGAAGTTGATGTTGAGAAGGCTATGGCTGATGATTGCTCAAGTGCAAATCAAATAGATAAAATCAGCCCAGGTAATTCCTGTTCAGATGGTGCTGATGTCCCGAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCCCTGATGTGCGATGAGCAAGATACAATGTTCATGACAGCTGCCTCTCCCATTGGGCCAACGACTCGTGTTTGCAATACATCTTCGCAATTTCCTTGTGGACAAGGAGTGACAGAGGTCTATGCTGAGCAAGAAAGAGCTGTATTAACGCAGTTTAGAGATTTCCTCAATAGGGTTATCACTATGGGAGAAATAAATGAGACAAAGTGTTCTTCTTTGGCTAGAAGTGAATTAGAGAATCAAAAGGACCCAATCAACAATGAAATTGGAAATGCCAGTACTGATATAGTACATCAGCAAGAAGCCACTAACAATGGTGATACCAAAAATATAGATCCATCTATGCCCACAACTTCAACACCTGTGATACCTAATGATATTGTAGCTGAAAATGGAGAAAAAATTAATCTGAAGATGGAAAAAGAGATATTAAAGGATTCTTACTTAGAAGAATATGAAGAGAGACATAAATGA 1815 0.4259 MAEGEGGDCGMKNVPSPAALEFVVSASPTAATTAWLDAPAKKLARQLDFNAMMEQSKPQLQTPSLMLQKQVSGSPLPHQTLHGSVRVGKPESPKPRSRPNFDMKEGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPQGTRASSEEAGEGVILVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHVDQNQNQNQNNHTYIQQAANAAITGAIGSYGFSSPPVSKKRKGQELFLWPTAKDPSISKSGQQVNHVKAPAPSSALSPASSARVGNATLGHSPSKLKYRSLLADVIQPHHLKELCSVLVLVSGQAAKTRADQKNLMEKHTEDQTETSLASSTEGQLPTQKEVDVEKAMADDCSSANQIDKISPGNSCSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPIGPTTRVCNTSSQFPCGQGVTEVYAEQERAVLTQFRDFLNRVITMGEINETKCSSLARSELENQKDPINNEIGNASTDIVHQQEATNNGDTKNIDPSMPTTSTPVIPNDIVAENGEKINLKMEKEILKDSYLEEYEERHK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01751 604 MobiDBLite consensus disorder prediction 296 331 - -
Car08g01751 604 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 84 561 - -
Car08g01751 604 ProSiteProfiles CRC domain profile. 110 234 IPR005172 -
Car08g01751 604 MobiDBLite consensus disorder prediction 68 111 - -
Car08g01751 604 MobiDBLite consensus disorder prediction 89 111 - -
Car08g01751 604 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 197 231 IPR005172 -
Car08g01751 604 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 111 146 IPR005172 -
Car08g01751 604 MobiDBLite consensus disorder prediction 372 401 - -
Car08g01751 604 MobiDBLite consensus disorder prediction 550 571 - -
Car08g01751 604 SMART CXC_2 194 235 IPR033467 -
Car08g01751 604 SMART CXC_2 109 149 IPR033467 -
Car08g01751 604 MobiDBLite consensus disorder prediction 298 331 - -
Car08g01751 604 PANTHER TESMIN/TSO1-RELATED 84 561 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01751 Car-Chr8 27424053 27431588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01751 39 526 CPP Transcription Factor Family AT4G29000 55.028 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Car08g01751 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01751 - - gmx:100818116 822.002