Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01749 ATGGccaccactactcaacaccgcaccaccaccaTCTTCTCCTTCTTTCTTCTCTTCATTTCCCTTTTCAAAACCCTAACCCTAAATCCCCCTTTTTCCCCCCAACCACAACCACAATCTCCAAATTACATCATCGGATTCACTCAATACAAAACCGCTGATCACCACCGTGCTTACCTCGAATCCAATCTTCAATCAAAAGGGTGGCATTGGATCGTGCGGAAAAACCCCGCATCGAAATTTCCCACCGATTTTGGCGTCGTTTCGGTTAACGAATTGGGGGTTATTGAAGAGATTAAGAAATTGGGGCTTGTGAAGTATGTTAGTTTGGATATGAGCTATAAGAGAGGTTTGATGAAGCATAGGAATGATAAAGTTGGTTCCTTTGTTGATGGGAATAAACGGCCTGGGAAGATCTTCACCAGAATGTCGTTTTGTGATGCGGAAGAACAAGAAGATGATTTTGTTAAACGCAATGATTCTATCAAGTTGGGGCGAGAATTGTTGATTCAGCAGAGATCACAAGTTACTTCCATGTTTGGGGCAGAAGAACTGTGGACGAGAGGCTACACTGGTGCAAAGGTCAAGATGGCCATATTTGATACTGGCATTCGAGCTGATCACCCTCATTTCCGTAACATCAAGGAGCGTACAAATTGGACCAATGAGGATACGTTGAATGACAATCTTGGACATGGGACTTTTGTTGCTGGTGTTGTTGCTGGCATGGATGCCGAGTGTCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTTACTGATGCACAGGTGTCATATACCTCTTGGTTCCTTGATGCCTTTAACTATGCAATTGCTACTGATATGGATGTGCTCAATTTGAGCATAGGTGGACCTGATTACTTAGATCTCCCATTTGTGGAAAAGATATGGGAGATAACGGCCAATAACATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTATATGGAACTTTGAATAATCCAGCAGATCAAAGTGATGTCATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCGCGTGGCATGAGTACCTGGGAACTTCCTCACGGTTATGGCCGTGTGAAGCCAGACGTAGTTGCATACGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGAACCAGTGTTGCAAGTCCTGTAGTTGCTGGTGTCGTATGTTTGCTTGTCAGTGTCATACCTGAACCTGATCGCAAAAATATCTTAAACCCCGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAGCTTGCTGGACCTAACATGTATGAGCAGGGCGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTCAAGAACTACAAACCTAGGGCAAGCATCTTTCCCAGTGTTCTTGATTACACAGATTGTCCTTATACATGGCCCTTTTGTCGTCAGCCGCTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCTAGCATTTTGAATGGAATGGGTGTTATTGGCTATGTCGAAAGTCCACCGACATGGCATCCTTTTGAAGAAGTAGGGAATCTTCTAAGCATTCATTTTACATATTCTGAGGTCATCTGGCCTTGGACCGGTTATTTGGCCATTCATATGCAAATCAAGGAAGAAGGTGCACAGTTTTCTGGTAACATTGAAGGTAATGTGACTCTCAGGGTTTCCAGCCCTCCAGCTCAAGGAGAAAGGCGTCCTCAAATAAGCACATGTGTGCTTCAACTGAAGTTAAAAGTGGTGCCAACACCGCCACGAGCAAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCTCCAGGTTATATTCCTAGAGATTCCTTGGATGTTCGTAATGACATTCTTGACTGGCACGGGGATCATCTACATACAAATTTTCACATAATGTTTAACATGTTACGTGATGTTGGTTACTATGTTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCTCGACAGTATGGTACACTTCTTTTGGTGGATCTTGAAGAAGAGTACTTCGCCGAAGAGATTGAAAAGTTGAGAGACGATGTGATAAATACCGGATTGGGAGTAGCTGTCTTTGCTGAGTGGTACAACGTAGATACCATGGTAAAGATGAGATTCTTCGATGATAATACACGGAGTTGGTGGACCCCGGTCACTGGAGGTGCTAATAATCCTGCACTTAATGATCTTTTGGCTCCATTTGGAATAGCTTTCGGTGATAAGATTCTGAGCGGTGATTTTTCACTTTTTGGTGAGGAGAATCGATATGCATCTGGGACAGACATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTTCCTTTCTCGGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGTTGCTGACTTCTAGCACCACCAAGGCAGATTCTCCGATTCTCGGTCTTACAGTGATGGGTGAAGGTCGCATCGCTGTATACGGTGACTCCAACTGTTTGGACAGCAGCCATATGGTGACTAACTGTTTTACACTTCTGAAGAAAATGCTAGATTTTACGAGTGAGAATGTTCGAGATCCAGTGCTTTTCTCAAATTCAAACAAACAAGACACTCCTTTGTACGAAGATGACAATCAGTTGCCATCACGCAGAACTGATGTAAATTTCTCTTCATACTCAGCTGTTATCGGAAAAGAATTGATTTGCAGGACTGACACAAGGTTCGAAGTCTGGGGAACTAAGGGCTACAGTTTGCAAGTCAGAGGAAGAAACAGACGATTGCCTGGTTATCCTGTCATTGATTTAGGGAATGGTTTCAATTCAACCTATGATGTTTCTAATATTAGGCATTCGAAGGTAACTTTGAGAAATAAGGATGACTCTCTTGGGAACAGATATTTGGGCCTGTTCTATGGAGATGAGCTTGATGTACCTATGCTGGTTGCAACCGGTATCTTACTATTGAGCTTTTGGCGCATTCGCCAAAAGAGACGTCGAAGAAGGAAAGGATCAAGCTCTGGCAGATTGTCCAATTTATAG 3051 0.4261 MATTTQHRTTTIFSFFLLFISLFKTLTLNPPFSPQPQPQSPNYIIGFTQYKTADHHRAYLESNLQSKGWHWIVRKNPASKFPTDFGVVSVNELGVIEEIKKLGLVKYVSLDMSYKRGLMKHRNDKVGSFVDGNKRPGKIFTRMSFCDAEEQEDDFVKRNDSIKLGRELLIQQRSQVTSMFGAEELWTRGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGMDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKNYKPRASIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPTWHPFEEVGNLLSIHFTYSEVIWPWTGYLAIHMQIKEEGAQFSGNIEGNVTLRVSSPPAQGERRPQISTCVLQLKLKVVPTPPRAKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDVGYYVETLGSPLTCFDARQYGTLLLVDLEEEYFAEEIEKLRDDVINTGLGVAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANNPALNDLLAPFGIAFGDKILSGDFSLFGEENRYASGTDIVRFPRGGYVHSFPFSDSSESGATQNVLLTSSTTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFTLLKKMLDFTSENVRDPVLFSNSNKQDTPLYEDDNQLPSRRTDVNFSSYSAVIGKELICRTDTRFEVWGTKGYSLQVRGRNRRLPGYPVIDLGNGFNSTYDVSNIRHSKVTLRNKDDSLGNRYLGLFYGDELDVPMLVATGILLLSFWRIRQKRRRRRKGSSSGRLSNL 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01749 1016 ProSiteProfiles Serine proteases, subtilase domain profile. 171 462 - -
Car08g01749 1016 CDD Peptidases_S8_SKI-1_like 186 442 IPR034185 -
Car08g01749 1016 PRINTS Subtilisin serine protease family (S8) signature 395 411 IPR015500 -
Car08g01749 1016 PRINTS Subtilisin serine protease family (S8) signature 192 211 IPR015500 -
Car08g01749 1016 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Car08g01749 1016 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 39 859 - -
Car08g01749 1016 Gene3D Peptidase S8/S53 domain 166 458 IPR036852 GO:0004252|GO:0006508
Car08g01749 1016 SUPERFAMILY Subtilisin-like 174 466 IPR036852 GO:0004252|GO:0006508
Car08g01749 1016 ProSitePatterns Serine proteases, subtilase family, serine active site. 396 406 IPR023828 -
Car08g01749 1016 Pfam Subtilase family 193 443 IPR000209 GO:0006508|GO:0008236
Car08g01749 1016 ProSitePatterns Serine proteases, subtilase family, histidine active site. 232 242 IPR022398 -
Car08g01749 1016 PANTHER PEPTIDASE S8 39 859 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01749 266 1014 Subtilisin-like Serine Gene Family AT5G19660 78.879 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01749 K08653 - gmx:100819188 1737.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01749 08 27398337 27405310 Car08g01749 08 27398337 27405310 ECH