Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01748 ATGTCTACTGCTCCGGCACCTTCTTCGCCGCCGGCGGGCAACGCCACCGCGCCTCCACCGTCAACCCCTGCCGCACCACCACCGGCCACACCTTCAGCACCACCTCCTGCAACACCTTCGCCACCGCCTCCGGCGACACCTTCGTCACCGCCTCCGGCGACTCCCTCATCACCTCCACCGGCGACTCCTTCATCACCACCTCCGGCTACTCCTTCATCACCACCTCCGAAGACACCCCCAACGTCTCCACCGTCAAAATCTCCGCCGTCACCCATCGCGCCGTCGACATCTCCGCCGGCACCCACCGGCGTAGTTACTACTCCGAGTCCACCTACACGGAGCTCGCCTCCCCCTCCTTCCAGAACTCCTCCGGCCATCAAAACTCCTCCGTCGTCTTCATCGTCTTCAAGCATTTCCACCGGCGTAGTCGTCGGAATCGCCGTCGGAGCAGTGGCGATTCTCGTAGTTCTAAGCATTCTCTGTATATGCTGTAGAAAAAAGAAAAGAAGACGTGATGAAGAATACTATGGTCATCATCAGCAACAACAGAGACCCAAAGTTGAATCTTATGGCGGTCCTCCGAACCAATGGCAACATAATGCTCAGCCTCCTTCCAATCACGCAGTCTCAATGATGCCTAAGCCACCACCTCCTGCCCCCGTTGCACCGCGTCCTCCATCTTACACGCCGCCGGCTCCTCCTCCTTTCGTGAACAGCAGTGGTGGGTCAGGATCAAACTATTCGGGCGGTGAACTGCTTCCACCTCCTTCTCCTGGCATTGCGCTTAGCTTCACAAAGAGCACGTTTACATACGAAGAGTTGGCGCGTGCTACTGACGGTTTCTCCGATGCTAACCTCCTCGGACAAGGTGGATTTGGATATGTTCATAGAGGTGTCCTCCCAAACGGTAAGGAGGTTGCTGTTAAGCAACTAAAGGCTGGAAGTGGACAAGGAGAACGCGAATTTCAAGCCGAAGTTGAGATCATTAGCCGCGTTCATCACAAACATCTTGTTTCTCTTGTTGGATACTGCAGCACCGGGTTTCAAAGGCTTCTTGTTTATGAGTTTGTTCCTAACAATACATTGGAATTCCATTTACATGGAAAAGGACGACCAACGATGGATTGGCTAACAAGACTGCGAATTGCTTTAGGATCAGCAAAAGGACTCGCTTATCTTCATGAAGATTGTCATCCAAAGATCATTCATCGCGATATTAAAGCTGCTAATATCCTTCTGGATTATAAGTTTGAGGCAAAGGTTGCAGATTTTGGTCTTGCAAAGATTGCCTCTGATCTCAATACTCATGTTTCGACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCATCTAGTGGAAAACTTACAGACAAATCAGATGTTTTCTCCTATGGAGTCATGCTCCTCGAGTTATTAACTGGACGACGACCGGTTGATAAAAATCAGACTTACATGGAGGATAGTTTGGTCGAGTGGGCTAGGCCTTTGCTCATGCGTGCTTTAGAAGAAGATCATTTGGATTCTCTGATTGATCCAAGGCTCCAAAATGAATTTGATCCTAATGAGATGACTCGTATGGTGGCGTGCGCTGCAGCTTGCACTCGTCACTCCGCAAAGCGTCGACCTAAGATGAGCCAGGTAAAGTGA 1656 0.5103 MSTAPAPSSPPAGNATAPPPSTPAAPPPATPSAPPPATPSPPPPATPSSPPPATPSSPPPATPSSPPPATPSSPPPKTPPTSPPSKSPPSPIAPSTSPPAPTGVVTTPSPPTRSSPPPPSRTPPAIKTPPSSSSSSSISTGVVVGIAVGAVAILVVLSILCICCRKKKRRRDEEYYGHHQQQQRPKVESYGGPPNQWQHNAQPPSNHAVSMMPKPPPPAPVAPRPPSYTPPAPPPFVNSSGGSGSNYSGGELLPPPSPGIALSFTKSTFTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCSTGFQRLLVYEFVPNNTLEFHLHGKGRPTMDWLTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDYKFEAKVADFGLAKIASDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELLTGRRPVDKNQTYMEDSLVEWARPLLMRALEEDHLDSLIDPRLQNEFDPNEMTRMVACAAACTRHSAKRRPKMSQVK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01748 551 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Car08g01748 551 SUPERFAMILY Protein kinase-like (PK-like) 260 550 IPR011009 -
Car08g01748 551 MobiDBLite consensus disorder prediction 1 138 - -
Car08g01748 551 Pfam Protein tyrosine and serine/threonine kinase 286 550 IPR001245 GO:0004672|GO:0006468
Car08g01748 551 MobiDBLite consensus disorder prediction 182 207 - -
Car08g01748 551 SMART serkin_6 281 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01748 551 ProSiteProfiles Protein kinase domain profile. 281 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01748 551 Gene3D Transferase(Phosphotransferase) domain 1 357 551 - -
Car08g01748 551 MobiDBLite consensus disorder prediction 11 126 - -
Car08g01748 551 Gene3D Phosphorylase Kinase; domain 1 262 356 - -
Car08g01748 551 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 43 550 - -
Car08g01748 551 CDD STKc_IRAK 287 550 - -
Car08g01748 551 PRINTS Proline rich extensin signature 47 68 - -
Car08g01748 551 PRINTS Proline rich extensin signature 32 44 - -
Car08g01748 551 PRINTS Proline rich extensin signature 11 27 - -
Car08g01748 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Car08g01748 551 MobiDBLite consensus disorder prediction 209 237 - -
Car08g01748 551 MobiDBLite consensus disorder prediction 173 254 - -
Car08g01748 551 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 43 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01748 Car-Chr8 27391084 27395102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01748 119 550 Trihelix Transcription Factor Family AT1G70460 51.818 1.15e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car08g01748 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01748 - - gmx:100781944 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01748 08 27391084 27395102 Car08g01748 08 27391084 27395102 ECH