Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01735 ATGGCAAATCTCTCCAACTTAGAGTCATTTGTCAAGATTCCAACTATAAAGTTTAAAAAGCTTTTCATCAATGGAGAATTCGTGGACTCAATTTCAGGAAAAACATTTGACACTGTTGATCCAAGAACAGAGGAAGTGATTACAAAAATAGCAGAAGCTACCAAAGAAGATGTTGATATTGCTGTGAAAGTTGCACGTGAAGCATTTGATTTTGGTCCATGGCCACGCATGACTGGTGCCGAGAGAGCAAAGATTATGCTTAAGTGGTCAGAGCTAATTGAACAGAACATAGAAGAAATAGCAGCATTAGATACAATTGATGGAGGAAAATTATATAGTTGGTGTAAAGCTGTTGATATTCCTGAAGCATCCAATATCCTACATTACTATGCTGGTGCTGCTGATAAAATTCATGGAGATGTTTTCAAAACTTCTAGGAATCTTCACATGTATACTTTGATGGAACCTATTGGTGTTGTTGGACACATTATTCCTTGGAATTTTCCAACTGTTATGTTCTTTGCTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACTATGATTCTTAAGCCTGCTNNNNNNNNNNNTGAACAAACACCTTTATCATCACTCTTTTTTGCTCATCTTGCTAAGAAGGCTGGTATACCAGATGGAGTGCTAAATGTTCTACCAGGATTTGGCTCAAATGCTGGTGCTGCAATAACCTCACACATGGACATTGATGCGATAAGTTTTACAGGTTCAACCGAAACCGGTCGCAAAGTAATGCAAGCGGCTGCGATGAGTAATTTGAAGTCGGTCTCACTTGAATTAGGAGGCAAGTCACCTGTCTTAGTTTTtgatgatgctgatgttgataaagctgttgatcttgCATTATTTGGTATCCTGCATAATAAGGGAGAAATCTGTGTTGCATTTTCTAGAGTTTTTGTTCAAGAAGGAATTTATGATGAATTTGAAAAGAAAGTGGTGGAAAAGGCAAGAAATTGGGTAGTTGGTGACCCTTTTGATCCTAAAGTTCAACAAGGACCTCAAACTAGTAAGGCACAATTTGATAAAATTATTTCATATATTAAGCATGGAAAGAATGAAGGAGCCACATTATTGACTGGTGGTAAGCCAATTGGAAACAAAGGATACTACATTGAGCCAACAATTTTTGCCAATGTTAAGGATGACATGCTAATAGCACAAGAGGAAATATTTGGTCCTGTTATGACCCTTTCTAAGTTCAAGACAATTGAGGAAGCAATTAACAAGGCCAACAATACAAAATATGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGACATTGCAAATACTGTCTCAAGGTCAATTCGTGCAGGCATAATTTGGATTAATTGCTACTTTGCATTTGATATTGATTGTCCTTTTGGAGGGTGTAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTTCACAAGTATCTTAAAGTTAAATCTGTTGCAACTCCTATTTATAATTCTCCTTGGCTTTGA 1512 0.3657 MANLSNLESFVKIPTIKFKKLFINGEFVDSISGKTFDTVDPRTEEVITKIAEATKEDVDIAVKVAREAFDFGPWPRMTGAERAKIMLKWSELIEQNIEEIAALDTIDGGKLYSWCKAVDIPEASNILHYYAGAADKIHGDVFKTSRNLHMYTLMEPIGVVGHIIPWNFPTVMFFAKVAPSLAAGCTMILKPAXXXXEQTPLSSLFFAHLAKKAGIPDGVLNVLPGFGSNAGAAITSHMDIDAISFTGSTETGRKVMQAAAMSNLKSVSLELGGKSPVLVFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVVEKARNWVVGDPFDPKVQQGPQTSKAQFDKIISYIKHGKNEGATLLTGGKPIGNKGYYIEPTIFANVKDDMLIAQEEIFGPVMTLSKFKTIEEAINKANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFDIDCPFGGCKMSGFGRDYGLEALHKYLKVKSVATPIYNSPWL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01735 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Car08g01735 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Car08g01735 503 Pfam Aldehyde dehydrogenase family 28 493 IPR015590 GO:0016491
Car08g01735 503 SUPERFAMILY ALDH-like 11 499 IPR016161 GO:0016491
Car08g01735 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 491 IPR016162 GO:0016491
Car08g01735 503 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 5 503 - -
Car08g01735 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Car08g01735 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01735 Car-Chr8 27205827 27210245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01735 6 503 Aldehyde Dehydrogenase Gene Family AT3G24503 67.335 0.0 715