Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01728 ATGACAAAAGTGCAAGAGAAAATGAATCATCATAATGGGGTGAATTTATCAATCCAAAGAGGCTTTGTCACAAAATTAAAATCAGGATTGAAAGAAACTTTCTTCCCTGATGATCCATTTAGGACAATTATGGAAGAAGAAAAATTATCTCGTAGGGTAATTAAAGGGGTACAATATTTTGTACCAATATTTGAGTGGTTACCAAATTATAATTTGCGTATTTTTCTCTCTGATTTAATTGCTGGTCTCACCATTGCTAGTCTTGCCATTCCTCAAGGCATTAGTTATGCCAAACTTGCCAATCTTCCTCCTCTTGTTGGACTTTATTCAAGCTTTGTGCCACCACTAGTGTATGCTGTTTTTGGGAGTTCTAGGCACATGGCTGTGGGAACAATAGCTGCAGCATCATTGCTTATTGGTAACACTATATCAAGTGTAGTTGATCCTATAGAGGACCCAACATTGTATCTTCATTTGATTTTCACAACAACTTTTGTCACTGGTGTTTTCCAAGCTTGTTTGGGTTTTTTCAGGTTGGGAATATTAGTGGATTTCTTTTCCCATTCTACCATCACTGGATTCATGGGAGGCACTGCAGTAATTCTTATCCTTCAACAACTAAAGGGTATATTTGGATTAAAACATTTTTCATCCAAAACCAATATTATAGCTGTGATACAGGGCATCATCGCCAATAGGCATGAGATACGATGGGAAACAACAGTTCTTGGAATAATCTTCCTTGTTTTCTTACAATTTACAAGGCACTTGAGGACAAAAAAACCAAAACTCTTTTGGGTATCTGCTATAGCTCCAATGACAACTGTAATTGTTGGTGGCCTTTTTACATACCTTGTCAAAGGTCAAAATCATGGAATTCAAATTGTGGGACATCTAGATAAAGGATTAAATCCTATATCAATCCAATATTTCAACTTTGATAGTAAATATTTATCAGCAGTGCTTAGAGCTGGCCTAATCACTGGAGTTTTGTCATTAGCGGAAGGAATAGCCATAGGAAGAAGCTTTTCAGTTACTGATAATACACCTCATGATGGAAACAAAGAGATGATAGCTTTTGGCCTTATGAACTTATGTGGTTCTTTTACATCATGTTACTTGACTAGTGGACCATTTTCGAAGACGGCTGTAAATTACAATGCAGGGTGTAAAACAGCCATGACAAATGTGGTACAAGCAATCCTAATGGCTCTAACACTACAATTTTTGGCACCATTATTTAGCAACACACCAATTGTTGCTTTATCAGCTATTATTATATCAGCCATGGTTGGTCTCATAAATTATGAAGAAGTTATCTATCTCTTCAAAGTTGACAAATTTGATTTTCTTATTTGCATGGGTGCATTCTTGGGTGTCACCCTTATATCCATGGATGTTGGCCTCATGATCTCTGTTGGGCTAGGTATACTTAGAGCACTATTATATGTAGCTAGACCAGCAACATGCAAGCTTGGAAAGTTATCTGATTCTGGTTTATACAGAGATGTTGAGCAATATACAAATTCTTCAACAATTCCAGGAGTTTTAATTATACAAGTTGGTTCCCCTGTTTATTTTTCAAATGCTACTTATATTAAAGAAAGGATTCTGAGGTATATTAAAAGTGAAGAAACCTCTTCTGGAGATATTGTTGAATACACCATACTTGATTTGACAGGAGTGACATCCATGGACACAACTGCTATTGAAGGATTATTGGAGACAAATAAAATATTACAAAGCAGAGGAATTCAGATGTCATTAGTAAACCCAAGGATGGAGGTTATGGAGAAGCTAATAGCATCCAAATTTGTTGAACATATTGGAAAGGAATCATTCTATCTAAATTTGGATGATGCAGTGATGGCAAGTCAATATTCCCTTAGAACATCCAAGACCAACTACAATGAAGACACAGCTTAA 1926 0.3609 MTKVQEKMNHHNGVNLSIQRGFVTKLKSGLKETFFPDDPFRTIMEEEKLSRRVIKGVQYFVPIFEWLPNYNLRIFLSDLIAGLTIASLAIPQGISYAKLANLPPLVGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGNTISSVVDPIEDPTLYLHLIFTTTFVTGVFQACLGFFRLGILVDFFSHSTITGFMGGTAVILILQQLKGIFGLKHFSSKTNIIAVIQGIIANRHEIRWETTVLGIIFLVFLQFTRHLRTKKPKLFWVSAIAPMTTVIVGGLFTYLVKGQNHGIQIVGHLDKGLNPISIQYFNFDSKYLSAVLRAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAMTNVVQAILMALTLQFLAPLFSNTPIVALSAIIISAMVGLINYEEVIYLFKVDKFDFLICMGAFLGVTLISMDVGLMISVGLGILRALLYVARPATCKLGKLSDSGLYRDVEQYTNSSTIPGVLIIQVGSPVYFSNATYIKERILRYIKSEETSSGDIVEYTILDLTGVTSMDTTAIEGLLETNKILQSRGIQMSLVNPRMEVMEKLIASKFVEHIGKESFYLNLDDAVMASQYSLRTSKTNYNEDTA 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01728 641 SUPERFAMILY SpoIIaa-like 510 622 IPR036513 -
Car08g01728 641 Pfam Sulfate permease family 75 454 IPR011547 GO:0016021
Car08g01728 641 TIGRFAM sulP: sulfate permease 62 621 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car08g01728 641 Gene3D STAS domain 486 628 IPR036513 -
Car08g01728 641 CDD STAS_SulP_like_sulfate_transporter 507 618 - -
Car08g01728 641 Pfam STAS domain 508 621 IPR002645 -
Car08g01728 641 PANTHER SULFATE TRANSPORTER 3.5-RELATED 7 635 IPR030316 GO:1902358
Car08g01728 641 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
Car08g01728 641 ProSiteProfiles STAS domain profile. 506 625 IPR002645 -
Car08g01728 641 PANTHER SULFATE TRANSPORTER 7 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01728 Car-Chr8 27133395 27140537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01728 12 633 Inorganic Solute Cotransporters AT5G19600 61.415 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01728 K17471 - gmx:100789107 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01728 08 27133395 27140537 Car08g01728 08 27133395 27140537 ECH