Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01725 ATGGCGAGTCGGTTGAGAGAAGATGAGAAAAACGAGCGCGCGATTCGAGCTCTTCTCAAGCTTCAACCTAATCGAAGATGCATTAACTGCAACAGTATGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAATTGTAGTGGAATACACCGTGAATTTACACATCGTGTGAAATCAGTTTCAATGGCTAAATTTACTTCGCAAGAAGTTACTGCACTTCAAGAAGGAGGAAATCAACTTGCAAGGGACATTTATTTTAAAGAATGGGATGCACAGCACCATTCTTTCCCTGACAGCAGTAATGTTAACAGGCTCCGCGACTTTATTAAGCATGTTTATGTGGATAGGAGATTCACCGGAGATAGGAACTCTGATAAACCACCAAGAGTAAAGGCCGGTGACAAAGATGAGTCCTATGAAAACAGGAAAGTTGAGGCGTATCAGGGAGGATCTAGAAGCCCTCCATATAGTGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATAATAAGAGAAGTCCTGGCCGTCCTCCAATTGTCAATGATTGGCGTCGTGAAGATCGTAGAATATCAGATGGAGATCGTAAGGTGGAAAGCCAATCTCCTGAGCGAGCTAGAGATCTAGGTTCTTCAAGCCCACCTGTGGTACGGCCCGTTAGAGATATTTTGGGAGAAAATGTAGTACCTCTTCGGATAAGTGGACCCCCCAACCCAAACAGTGGAAAGGCTGCTGACGCCTCAGCACTGACACAGAGAACTGCATCCTCTGGTAGCTTGGTATCCAGCAACGAAAGCCCAGTAGATATTAAGCTTGAGACTACTACGAGCCTTATTGATTTTGATGCTGATCCTGAACCTATAGCTCCAGCGATTCCTCAAGCCCAACAAACTACTGTGCCACAACCTGTTTTGCAGTCAGGAAATTCCGCTGATGACAATTGGGCCTCTTTTGATGTTGTTTCTGAGGCGAAAAGAACTCCAAACACCTCAAATTTAAATCCACTTGAATCAGTATTGTCCCAATTGTCTGTGCCAGCATCCTTACCTGCTCATGCTTCAGGAGTCCAAGGACCTATTCCAGAAGCAGCTCCTAGTTCTGCTTATGGTGGTGCAAGTGCTGGCAGTTTTGCAGCTTTCCCACAAAGTGGTGCTTCAGTGCCATATCCTGGGCCGGCAACTGTATCACCTCTTAAAAATGCAGGGCAGTGGGCCAGTTTGCAGCATCAGCAACTAATGTTCCCTGCTGCATCTAGTCAGTCTGCCGGTCAACAATTTCCACAGTCAGTTGGTGGTGCTGTAAATAGTCAGCCATGGCACGTACCTTTTGTATCCACAGGACAGGGGCATCCGAGTACACCAATGCCACATGCATACCATCATGCTTCAAAGCCTGCCAATGAGGCTATAAACAGTGCTGTTTCTCAACCGTCTGCTGTAGAAGTAAAACCAAGTGGAAGATCAGAACTTCCTGAAGATCTGTTTACTGTAAAACACTCGGCCTTCCCTGCTCCAGTTCTAGGTTGGCAAATGGGTCTTCCTCAGGGCATGGGCATCTCAATGCAATATAATAATATGGTGCCGGTGCCAAGTTTTTCGCAGCCATCAAGGTCGACAAATCCATTTGATGTCAGCAGCAAACCAACCCCAGATCAAACCCCAAGTATGCAGTTTCCTTCCATGTCATCCTTTCAAGGTGCCTTGCCTAGTGTACCACCATCAGTTGCACTACACCCTTCAAGCCTGGGAAATCCGTCGCATGCATGGACTCCACCCTTGCGCAATCCATCCTATGCCTGGACTCCAGCTCCATCGTCATCATATGCATCAGCCCTACCTCCACAAGCACAAACTCATGCATCAGCTCTGGGACCAGGGTCTTATATGGGGCAACAAATGGCAACTAACATACCAATGCCAAGGCAAGAAGTTGGGAATTTTGGAACGGAGGGATCCGTTTTCGGCTTGTCAAATCCAGAACAGCAGCTGACTGATAGGCCGTCAACCACTCCCACCTCTAACTCATTCCCTAGAGGAGGGAACCCATTTGGATAA 2091 0.4692 MASRLREDEKNERAIRALLKLQPNRRCINCNSMGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVTALQEGGNQLARDIYFKEWDAQHHSFPDSSNVNRLRDFIKHVYVDRRFTGDRNSDKPPRVKAGDKDESYENRKVEAYQGGSRSPPYSDRSSPGGRSPGYDQESRQYGDNKRSPGRPPIVNDWRREDRRISDGDRKVESQSPERARDLGSSSPPVVRPVRDILGENVVPLRISGPPNPNSGKAADASALTQRTASSGSLVSSNESPVDIKLETTTSLIDFDADPEPIAPAIPQAQQTTVPQPVLQSGNSADDNWASFDVVSEAKRTPNTSNLNPLESVLSQLSVPASLPAHASGVQGPIPEAAPSSAYGGASAGSFAAFPQSGASVPYPGPATVSPLKNAGQWASLQHQQLMFPAASSQSAGQQFPQSVGGAVNSQPWHVPFVSTGQGHPSTPMPHAYHHASKPANEAINSAVSQPSAVEVKPSGRSELPEDLFTVKHSAFPAPVLGWQMGLPQGMGISMQYNNMVPVPSFSQPSRSTNPFDVSSKPTPDQTPSMQFPSMSSFQGALPSVPPSVALHPSSLGNPSHAWTPPLRNPSYAWTPAPSSSYASALPPQAQTHASALGPGSYMGQQMATNIPMPRQEVGNFGTEGSVFGLSNPEQQLTDRPSTTPTSNSFPRGGNPFG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01725 696 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Car08g01725 696 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Car08g01725 696 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Car08g01725 696 MobiDBLite consensus disorder prediction 617 696 - -
Car08g01725 696 MobiDBLite consensus disorder prediction 663 696 - -
Car08g01725 696 CDD ArfGap_AGFG 12 122 - -
Car08g01725 696 MobiDBLite consensus disorder prediction 617 651 - -
Car08g01725 696 MobiDBLite consensus disorder prediction 157 172 - -
Car08g01725 696 MobiDBLite consensus disorder prediction 256 280 - -
Car08g01725 696 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Car08g01725 696 MobiDBLite consensus disorder prediction 123 147 - -
Car08g01725 696 MobiDBLite consensus disorder prediction 123 280 - -
Car08g01725 696 PANTHER ARF GTPASE ACTIVATOR 1 696 - -
Car08g01725 696 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Car08g01725 696 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Car08g01725 696 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Car08g01725 696 MobiDBLite consensus disorder prediction 542 577 - -
Car08g01725 696 PANTHER ARFGAP/RECO-RELATED 1 696 IPR044820 GO:0005096
Car08g01725 696 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Car08g01725 696 MobiDBLite consensus disorder prediction 191 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01725 Car-Chr8 27064417 27072296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01725 12 122 C2H2 Transcription Factor Family AT4G21160 31.452 5.96e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01725 - - gmx:102669541 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01725 08 27064417 27072296 Car08g01725 08 27064417 27072296 ECH