Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01722 ATGACTGAAACTAAGTCAGCTAGTAAGATCGTCAAGAAACAGGACTCGAAAAAAGTTTCCGGCCTCGGCAATCAGGCTTCGAGGAAGCAACATCGCAAGGGAGAAAACCCTATTCGATTCGTGCCGGCTGCTGACCATCCTCCTGATTATGGACATTCAAACTCGTGGATCTGTAAAAACTCGGCTTGTAGAGCAGTTCTATCCAAAGATGACACATTCTGTAGAAGGTGCTCTTGCTGTATTTGTCATCTTTTCGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCAGTGAATCTTCTCAAGGGGACTCTTGTGGATTGTCTTGTCATATTGAGTGTGCACTTCAACATGAAAAAGTTGGAGTTGTTGATCATGGACAACTTATGCAACTTGATGGTGGTTATTGTTGTGCCTCCTGTGGCAAAGTTACCGGGATACTCGGATGCTGGAAGAAGCAGCTAAATATAGCGAGAGATGCTCGACGTGTGGATGTACTATGTTACAGGATATATTTGAGCTACAGGCTTCTGAACGGAACTTTGAGATTTAAAGAATTGCATGACATGGTTCAAGAGGCAAAGGCTAAACTAGAAAAAGAAGTTGGTCCTGTTAATGGCATTTCTTCCAAGATGGTACGTGGCATTGTCAGCAGACTCCCAATTGCCAGCGACGTGCAGAAATTATGTTCTCTTGCTATCGAGAAAGCTGATGAGTGGTTGGCTAAGGTTGACAATCCAGAATCCAAAGAGGGTTCACTTCCTGCTGCATGCAAGTTTGTGTTTGAGGAGGTAACAGCTTCCTCAGTCAAAATCATTTTACTTCAAATGACAAATGTATCTTCTGAGGACATTAAGGGATACAAGCTTTGGTATTACAAGAGTAGAGTGGAATCACACACACAAGATCCTGTTTGTGTGTTTCCTAAAGCTCAGAGGAGGATTTTGATATCCAATCTCCAACCTTGCACCGAATATACTTTTCGGATCGTATCTTATACAGATATCGGCGACCTTGGTCATTCCGAGGCTAAGTGTTTCACCAAGAGCATTGAGATATTGGAAAAGAATCCGTGTTCATCGGTTGACATGAACACTAAAAAGGAGAATACTCAAACTGTAGGCAATACTTCTGGCTCCAAAATGGAGCCTGAGCCCGATCCTACAATGGCAGACTCCGGATTCAAGGTTCGAGACCTTGGAAAGATTTTGCACCTTGCTTGGGCTCAAGAACAAGGTTGCCTTGAAGGCTTTTGTCGAGCTGATATGAAAAATTGCTGTGGTCAAAGTGAAACAATCAAGCCTAGCAACCCAGAAGAGAAGTTAGTGCCTTTGGTTTCTCGAGACCTTGATCTGAATGTTGTTTCTGTGCCTGATTTAAATGAAGAACTCACTCCTCCTTTTGAGTCTTCTAGGGATGAAGATAACGGTTGCACTTTGCAGCAGGCTGTTGAGGCAGATGATGATGCTGCTTCTCATGATTTAGAGAAGAACCTAGCAAGACCACATGGTAGTGGTGGTTCACAAACATGGAACCATGGACTAACAGGAGAAGTTCCGGCCGTTGACTCCCGAGTAGTCATAGATGCAAGTAGGAAAAGGGTAGCAAGCACAAATGAAGAGGCTCACGATTGTGACAGCACCTTAATAAACGGATCTCCTTTACACGTATCAGATGGTTCGTTCTCCTTAGACGAGAACTTTGAGTATTGTGTTAAAGTAATTCGTTGGCTAGAATGTCAGGGCCATATCAAGCAAGAGTTTAGGTTGAAATTGTTGACATGGTTTAGTTTGCGGTCGACGGAACAAGAACGTAGGGTGGTTAATACTTTCATTCAGACTCTGATCGATGATCCGAGTAGTTTGGCAGGTCAACTTGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGTTCAATAATAAGGCTGTGGCAATAAATTAA 1956 0.4289 MTETKSASKIVKKQDSKKVSGLGNQASRKQHRKGENPIRFVPAADHPPDYGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCSESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIARDARRVDVLCYRIYLSYRLLNGTLRFKELHDMVQEAKAKLEKEVGPVNGISSKMVRGIVSRLPIASDVQKLCSLAIEKADEWLAKVDNPESKEGSLPAACKFVFEEVTASSVKIILLQMTNVSSEDIKGYKLWYYKSRVESHTQDPVCVFPKAQRRILISNLQPCTEYTFRIVSYTDIGDLGHSEAKCFTKSIEILEKNPCSSVDMNTKKENTQTVGNTSGSKMEPEPDPTMADSGFKVRDLGKILHLAWAQEQGCLEGFCRADMKNCCGQSETIKPSNPEEKLVPLVSRDLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLEKNLARPHGSGGSQTWNHGLTGEVPAVDSRVVIDASRKRVASTNEEAHDCDSTLINGSPLHVSDGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFNNKAVAIN 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01722 651 MobiDBLite consensus disorder prediction 1 40 - -
Car08g01722 651 Gene3D Immunoglobulins 248 351 IPR013783 -
Car08g01722 651 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 647 IPR044514 GO:0010048|GO:0040029
Car08g01722 651 MobiDBLite consensus disorder prediction 1 16 - -
Car08g01722 651 PANTHER VIN3-LIKE PROTEIN 1 4 647 - -
Car08g01722 651 Pfam Fibronectin type III domain 260 340 IPR003961 GO:0005515
Car08g01722 651 ProSiteProfiles Fibronectin type-III domain profile. 254 353 IPR003961 GO:0005515
Car08g01722 651 SUPERFAMILY Fibronectin type III 260 338 IPR036116 GO:0005515
Car08g01722 651 MobiDBLite consensus disorder prediction 362 383 - -
Car08g01722 651 CDD PHD_VIN3_plant 78 141 - -
Car08g01722 651 CDD FN3 259 338 IPR003961 GO:0005515
Car08g01722 651 MobiDBLite consensus disorder prediction 362 389 - -
Car08g01722 651 Pfam PHD - plant homeodomain finger protein 58 175 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01722 Car-Chr8 27037277 27045425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01722 54 642 PHD Gene Family AT3G24440 49.007 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01722 - - gsj:114418583 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01722 08 27037277 27045425 Car08g01722 08 27037277 27045425 ECH
Car06g00294 06 3223495 3227876 Car08g01722 08 27037277 27045425 PCT