Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01692 ATGGAGGAAAATCTACCTCCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATTTAACAATGAAAATTTCTGATCATTCATTCACATCAAAAGCTGTTGCAGTTGTTGATCTCAACAAATCTGAACCTTGGGATCTTCCAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAGTATCCAACTGGACTTAGAACAAATAGAGCAACTGAATCAGGGTATTGGAAAACCACTGGAAAAGACAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTTTTTTATAAAGGTAGAGCTCCAAGGGGTGAGAAAAGCAATTGGGTCATGCATGAATATAGACTAGAAAATAAACATCACTTTCGATCTTCAAAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCATAGCATCAAAAAAACCACAACAAACATCATCCTCCCAACCACAATCCCCATGTGACACAACCTCAATAGTAAATGAATTTGGTGATGTTGAGCTTCATCATATGGATTATTCAACTAACAACATTTCACCACAAAATTTCAACACTAATAATGTTAACACAAATATGAACTTGACAATGAATTCATGGCCATCTTCAAGTGATGTTCCTCATTCTCTTCCAATATCTCTACCATGGCCTTCTAGCTTGTTGAATCCAAATAACATTAATGTAAATTCATTGCTTCTAAAAGCATTACAACTTAGGAGTTATCAACAACAAAGAGAAGTTGTTGCACCAACAAATATTCATCATTTTGCACCATACATGTCTCAAGTTGGAGTACTATCTCATTCTCAACTTGGAAATGACCAAAGTAATAATGATTCAAATATAAGTGCTTCTTCTTCAAAAGTTTTAGAATGTATGCCACAACATAATCAACAGGAGCAACCATTCAACTTGGACTCTATTTGGTGA 975 0.359 MEENLPPGFRFHPTDEELITHYLTMKISDHSFTSKAVAVVDLNKSEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRSSKDEWVVCRVFQKSIASKKPQQTSSSQPQSPCDTTSIVNEFGDVELHHMDYSTNNISPQNFNTNNVNTNMNLTMNSWPSSSDVPHSLPISLPWPSSLLNPNNINVNSLLLKALQLRSYQQQREVVAPTNIHHFAPYMSQVGVLSHSQLGNDQSNNDSNISASSSKVLECMPQHNQQEQPFNLDSIW 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01692 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 256 - -
Car08g01692 324 PANTHER BNACNNG63190D PROTEIN 2 256 - -
Car08g01692 324 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Car08g01692 324 Gene3D NAC domain 14 154 IPR036093 GO:0003677|GO:0006355
Car08g01692 324 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Car08g01692 324 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01692 Car-Chr8 26750538 26753405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01692 1 324 NAC Transcription Factor Family AT3G18400 55.202 2.61e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car08g01692 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01692 - - gmx:100780030 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01692 08 26750538 26753405 Car08g01692 08 26750538 26753405 ECH