Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01681 ATGATGTTCTTCTCCAGGTTATGTGCTTGCTTTCAGAAGGGTGGCGCAGCTTCTGAAGACGGCGGAGACGACGAAAACGACACCGTCGACGCCGGTGATTCTTCCAACCTTTTTTTCGACCTTCAAACTCTTCAACTTGCCACCAATTTCTTCTCTGAGCTCAACCAACTTGGTCGTGGAGGCTTTGGTCCTGTTTTCAAGGGATTGTTGCCAAATGGTGAAGAAGTGGCTATTAAAAAGCtgtcattggaatctagacaaggaattagagaatttacaaatgaagttaggctattactaagaattcagcaCAAGAATTTAGTCACTCTACTAGGTTGTTGTGCAGAAGGACCAGAAAAGATGCTTGTCTATGAGTATCTTCCAAACAAAAGCCTTGATCACTTTCTGTTTGATAAAAAGAAGAATTTGGATTGGACGACGCGATTTAGAATAGTTATGGGTGTAGCACGAGGACTTCTCTACCTGCACGAAGAGGCCCCAGAAAGAATTATTCATAGAGACATTAAAGCTAGTAACATATTGTTGGACGAGCAATTAAATCCGAAAATTGCGGACTTCGGCTTGGCAAGGCTGTTTCCCGGAGAAGAAACTCATGTGCAGACATTTAGGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCAATGCGTGGATATCTTTCTGTAAAGACCGATGTTTTTAGTTACGGAATCTTGGTGTTGGAAATTGTTAGTGGGAGAAAAAACCATGATGCGAAGCTTGGGGCAGAAAAAGTAGATATCCTAAGCTATGCATGGATGCTTTATCAAGGAGGGAAGATTATGGATTTAATAGACGAAAAGGTTGGTAAATACAACAGCGACGAGGCGGCCATGTGCATTCAGCTAGGTTTATTGTGCTGTCAAGCTAGTGTAGTGGAGAGACCTGACATGAATTCAGTTCATCTTATGTTATCAAGTGATTCCTTCACATTGCCAAGACCAGGTAAANNNNNNNNNNCGTGTAGGAAAATGGAATACAAGTTCCACATCTGCTTTAACCAATACTAA 1053 0.3922 MMFFSRLCACFQKGGAASEDGGDDENDTVDAGDSSNLFFDLQTLQLATNFFSELNQLGRGGFGPVFKGLLPNGEEVAIKKLSLESRQGIREFTNEVRLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKKKNLDWTTRFRIVMGVARGLLYLHEEAPERIIHRDIKASNILLDEQLNPKIADFGLARLFPGEETHVQTFRISGTHGYMAPEYAMRGYLSVKTDVFSYGILVLEIVSGRKNHDAKLGAEKVDILSYAWMLYQGGKIMDLIDEKVGKYNSDEAAMCIQLGLLCCQASVVERPDMNSVHLMLSSDSFTLPRPGKXXXXCRKMEYKFHICFNQY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01681 350 SMART serkin_6 51 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01681 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Car08g01681 350 CDD STKc_IRAK 57 319 - -
Car08g01681 350 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 334 - -
Car08g01681 350 Gene3D Phosphorylase Kinase; domain 1 15 126 - -
Car08g01681 350 ProSiteProfiles Protein kinase domain profile. 51 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01681 350 Gene3D Transferase(Phosphotransferase) domain 1 127 325 - -
Car08g01681 350 Pfam Protein tyrosine and serine/threonine kinase 54 316 IPR001245 GO:0004672|GO:0006468
Car08g01681 350 SUPERFAMILY Protein kinase-like (PK-like) 39 328 IPR011009 -
Car08g01681 350 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01681 Car-Chr8 26646105 26649298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01681 25 329 Receptor kinase-like Gene Family AT4G11490 49.515 1.81e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car08g01681 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01681 - - aprc:113868075 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01681 08 26646105 26649298 Car08g01681 08 26646105 26649298 ECH