Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01680 ATGTACACTTCAAGGAAGAAAATCAGTAAAGACAAGGGTGCTGAGCCAACCGAATTTGAGGAAAAAGTTGCACAGGCGCTTTTTGACCTAGAAAATACCAACCATGAGCTGAAAAGTGAGCTGAAAGATTTATACATAAATTCAGCAGCTCAAATCGATGTTTCTGGAAGCCGTAAGGCTGTGGTTGCCCATGTTCCTTACCGTTTGAGGAAAGGGTTCCGCAAAATTCACGTCAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGCGGCAAGGATGTAATCCTTATCGCCACCAGGAGGATAGCAAGGCCGGGTTCTGCTGCTCAGCGTCCCCGAAGCCGTACTCTCACTGCTGTTCATGAAGCAATGCTTGAGGATGTCGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTGAGGTATCGTGTTGATGGATCCAAGATCATGAAGGTGTTTTTGGACCCAAAGGAGAGAAACAATACTGAGTACAAGTTGGAGACATTTGCTGCAGTTTACAGGAAACTTTCAGGCAAAGATGTTGTGTTTGAGTATCCTATTACTGAGGCTTAG 567 0.4497 MYTSRKKISKDKGAEPTEFEEKVAQALFDLENTNHELKSELKDLYINSAAQIDVSGSRKAVVAHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIARPGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITEA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01680 188 PANTHER 40S RIBOSOMAL PROTEIN S7 2 188 - -
Car08g01680 188 Coils Coil 27 47 - -
Car08g01680 188 PANTHER 40S RIBOSOMAL PROTEIN S7 2 188 IPR000554 GO:0003735|GO:0005840|GO:0006412
Car08g01680 188 Pfam Ribosomal protein S7e 7 183 IPR000554 GO:0003735|GO:0005840|GO:0006412
Car08g01680 188 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01680 Car-Chr8 26642810 26645495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01680 1 188 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 77.487 4.30e-110 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01680 K02993 - gmx:100527680 335.88