Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01679 ATGGCTGAATTCACAGAAAATTTTCAAAATATTATTAGACCCTCTTTTCCTTTCTTAGATTCTGATCAAAGCATGGAACTATTGAATCAATTCATAGGTATAAATCAACATGTTATGGATAATTCAAACATGAACATGCAAAATTTGATGTCTTTTTCTAGTGACAGTATCTTGTGTCCTTCTCAACAAGAGTTTCCAGGAAACTTGGAAGAAGATTTTCATCATGGTCTTGTTCATCATCACAATGCAGTTCAAGTTTCTGTTCCAAATTTTGAAGTTGGAAATAAAGTTCATGATGCTAAAAAGAGGAAAATTATGGATTTTCAAGAGACTAGTTCAGCAAATTCAACTCTTGCAGTTTCTGAGAGTGGAAGCAAGACCAAACTTAATGGTGGAAGAGGAAAAAGAGTGAAAAACTATGGAACAGAAGAAGAGAAAGCAAAGGAAGTTGTTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAGTGAGAAATTAAGGTGTTTGCAAAATATGGTGCCAGGATGTTACAAGACCATGGGAATGGCAGTAATGTTGGATGAAATCATAAACTATGTTCAATCTTTGCAACATCAAGTAGAGTTTCTTTCTTTGAAACTTACTGCAGCAAGTACTTATTATGACTTCAATTCAGAGACAGATGATTTAGAAACAATGCAGAAAGCAAGAGCATCTGAGGCAAAAGAATTAGGAAGGTACAAGAGAGAAGGATATGGAGGAATTTCATGCTTTCAACCAACATGGCCACTTTGA 813 0.3542 MAEFTENFQNIIRPSFPFLDSDQSMELLNQFIGINQHVMDNSNMNMQNLMSFSSDSILCPSQQEFPGNLEEDFHHGLVHHHNAVQVSVPNFEVGNKVHDAKKRKIMDFQETSSANSTLAVSESGSKTKLNGGRGKRVKNYGTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKISEKLRCLQNMVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSETDDLETMQKARASEAKELGRYKREGYGGISCFQPTWPL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01679 270 Coils Coil 236 256 - -
Car08g01679 270 SMART finulus 165 215 IPR011598 GO:0046983
Car08g01679 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Car08g01679 270 MobiDBLite consensus disorder prediction 116 137 - -
Car08g01679 270 PANTHER TRANSCRIPTION FACTOR BEE 1 2 269 - -
Car08g01679 270 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 269 IPR024097 GO:0006355
Car08g01679 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 226 IPR036638 GO:0046983
Car08g01679 270 CDD bHLH_AtBPE_like 149 234 - -
Car08g01679 270 Gene3D - 156 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01679 Car-Chr8 26623961 26626381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01679 65 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 55.708 2.12e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01679 - - gmx:100806942 404.445