Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01677 ATGGCTACTAAAAGGCTTTATGATGATTCTGATCAAGACCCAAATAACTCAAACGAAAAACGAATGAGACTTTCTTTAACTTCTGTAATAGGAAAGGCATTTATGGTGCAAAACTTGCCCAACACTTTAGCAGTCTTGGAACCTTTGATTAAAAGAGTGGTGAGAGAAGAGGTGGATCAAGCAATAAAAAAGTGCTTTTCACATTCCATTAATAGGTCACCTTCATTAAGAATCCAAGCACCAATTAAAGATAAACAATCAACCTTACAATTCAAATTCAACAAAAGGCTTTCCCTCCCAATTTTCACAAATAGTAGAATGCTTGACATTAATGGTAACCCAATCAACATAATTCTAGTTGACAAATCAAAAAATGACCAAATTGTCCCCACAAGTCTACCTTACCCTATAAAGCTAGAGATTGTTGTTCTTGATGGTGATTTTGCACTAAATGAAAAAGAGGATTGGACTATTGATGAATTCAATAGACACATTGTGAAGGAAAGACTTGGGAAGAGACCATTGCTTGCTGGAGAATTGAACTTGACTATGAGAGATGGAATTGCACAAATTGGTGACATTGAATTCACTGATAATTCTAGTTGGATAAGGAGTAGGAAATTTAGAGTTGCTATCAAGCTCATCAATCATGGGAGTAATCAAAGTGTTAGGATTCAAGAAGGCATCACAGATGCTTTTGTTGTTAAGGATCACCGCGGAGAATTGTACAAAAAACACCACCCACCAATGCTTGAAGACGATGTGTGGCGTCTAAAGAAGATTGGGAAAGATGGAGCTTTCCATAAAAAAATGGCTGCTCATGGAATCAAAACAGTGCAAGATTTTCTCAAATTAGCAGTTATTGATACTCATAAACTAAGAAAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGGATGTCGCAATAAAACATGCAATGACTTGTGACATGGGTAGCAAGATCTATATATACCGTGGACCTCAATTTATTATTTTTCTAAATCCAATATGCAAATTAATTAAAGCTGATATCAATGGACATGAATTTTCCTCCAAGGATTTGAGCCCAATAAATAAGAGCTATATAGACAAATTGGTTAGAGAAGCATACACAAGATGGCATGATTTGGAGGAAATTGATGAGGTTTTAAATGATAACATTGCTTTGTTAACTCAAGGTGATCAAGCTGTGGAGCAATATCCAAACAATCATCCAGCATCAATAGTAACTACATATCATCAAAATGATTATTATAGTGACAAATCAACAGATGTTGCTAGCTATGTAACAAGCAATAATGAAAAAATGGGATGCTATGAATTGTCACACAAACAAGCCTATACCACAACATCATTTGCAAATGGATTTCCTTTATGTTTCTCAGGCTCACAATCAGATGGAGAAATTACACTTCCAAATTCAGACCCTAGGGACATTGGTGGTGTCACAAGGCAACTGTAG 1464 0.3579 MATKRLYDDSDQDPNNSNEKRMRLSLTSVIGKAFMVQNLPNTLAVLEPLIKRVVREEVDQAIKKCFSHSINRSPSLRIQAPIKDKQSTLQFKFNKRLSLPIFTNSRMLDINGNPINIILVDKSKNDQIVPTSLPYPIKLEIVVLDGDFALNEKEDWTIDEFNRHIVKERLGKRPLLAGELNLTMRDGIAQIGDIEFTDNSSWIRSRKFRVAIKLINHGSNQSVRIQEGITDAFVVKDHRGELYKKHHPPMLEDDVWRLKKIGKDGAFHKKMAAHGIKTVQDFLKLAVIDTHKLRKILGIGMSDKMWDVAIKHAMTCDMGSKIYIYRGPQFIIFLNPICKLIKADINGHEFSSKDLSPINKSYIDKLVREAYTRWHDLEEIDEVLNDNIALLTQGDQAVEQYPNNHPASIVTTYHQNDYYSDKSTDVASYVTSNNEKMGCYELSHKQAYTTTSFANGFPLCFSGSQSDGEITLPNSDPRDIGGVTRQL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01677 487 MobiDBLite consensus disorder prediction 468 487 - -
Car08g01677 487 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Car08g01677 487 PANTHER OS02G0177800 PROTEIN 1 476 IPR012416 GO:0005516
Car08g01677 487 Pfam Calmodulin binding protein C-terminal domain 321 380 IPR046829 -
Car08g01677 487 Pfam Calmodulin binding protein-like N-terminal domain 89 238 IPR046831 -
Car08g01677 487 PANTHER PROTEIN, PUTATIVE-RELATED 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01677 Car-Chr8 26597219 26602350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01677 3 468 Calmodulin-binding Proteins AT5G57580 39.729 3.62e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01677 - - gmx:100803213 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01677 08 26597219 26602350 Car08g01677 08 26597219 26602350 ECH