Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01675 ATGTCTCCACCTCTTCTTCTACCTCCTTTTTCCTTCATCATCAAAACCTTTATCTTCCTCCCACTCTTCTTCTTAATCCCAACATACACCACTAGTGATGTTGAAAGTTACACATATTGTGCACCTTTTAGTTGTGGAAATCTAACAAACATTAGTTATCCATTTTGGAACATCAACAATCAACCAAGTTATTGTGGCCATCCAAACTTCACTCTCCATTGCCAACACAATAACTTGACTATTGAAATCAACTCACAAAAGTTTCACATCATTGATATAAATCAAACATCTCAAATTTTGAAGATTGCAAAGTTGGATTTATGGAGTTATGATGCTACTACTACATATTCTTGTCCTAAACAATATAATATAAACTTGGATTCAAATTTCTTCAAGTACACTTCCAACGACAAAAACTATACTCTATTGTATGAGTGTGATCCTCTTCCTAATCCATACTCATCTCCTTTGAGTCCTAAAGTTTTTCAAAAAATTTCTTGCCTCATTGATGGTAAACCTCAAGATGCATACTTAGTGTCAAGTGATAAATTGATTGATTTCATTGCTATGAATTGTAAGAATAGCATCATAGTTCCAAGCCTAAAGAGTTCCTTAAATGAAGACTCTAATATTTTAGAGGAAGGATTTGAGATTGGTTGGAGTGATATGGAAGAAGATATATGCGATGGTTGTGTGAAATCTAGTGGAAGATGTGGATACAATGTATCTCAAAATGAAGTTATGTGTCTTTGTCCTAATTCACAATATTTTGATGATTGTGGAATTTGCAACATGAAATCAAAGACTAAGATATGGATGGACAACTATGATTGTAAAAGATCTAGATTGTATAAATCTATGGCACCTTCACCATTAGGAGAACCAATACATGGAAAAACACCGTCAAATGGATTCACACCATCACATGCGATAGTACCGTCCTATGTTCCAAATTCAAAAGACTCTTCTGATTCTTCAAGCTCATTGGATTGGAAGTTGAAATTTGTTATTGGTGTTGCTTCTGCTGTGTTAGGAGCACTTGCTATGACAAGTTTTATATATTTCTATAAGCGTCGAAAGAATAGTAGTTATGCAAAGTCATATATTCAGTCTCACAACCTCTCTTCAGATATATCTTCAAAGGACCCTGAGATGGGAAGTCAACACTTTGGAAGAAGTCAAAATTTTGGAGTGCAACATTTCAATTATAGTGAGCTTGAAGAGGCTACAAACCACTTTGATCCATCCAAAGAACTCGGAGAAGGAGGCTTTGGGACAGTGTATTTTGGCAAACTGCATGATGGTCGTTGTGTCGCAGTGAAGAGGTTATATGAGAACAATTACAAAAGAGTTGAGCAATTCATGAATGAAGTTAAAATCCTAGCGAGATTAGTCCATCCAAATCTTGTGTCGCTGTATGGATGTACTTCACGCCACAGTCGCGAACTTCTACTTGTCTACGAGTATGTTTCTAATGGAACTGTCGCTGATCATCTTCATGGTAAACAAGCAAAACATGGAAAACTGTCTTGGCCTATTAGAATGAATATTGCtgtggagacagctagtgcattgaagtatcttcatgtttctgacattattcacagggatataaaaaccaataaTATTCTTCTCGATGCCCATTTTCGTGTCAAAGTAGCAGATTTTGGACTCTCGCGCCTTTTTCCGATGGATCATACTCATGTTTCAACAGCTCCACAAGGTACTCCAGGTTATGTCGATCCCGACTACCATCAGTGCTATCAACTTACTGAAAAGAGTGATGTCTATAGCTTTGGAGTTGTGATGATAGAGTTGATATCGTCTCTTCCTGCTGTCGATATCACAAGGCATAGACATGAAATCAATTTGGCCAACATGGCTATCAATAGAATTCAAAATCAAGCATTGCATGAACTTGTGGATCCTACTCTTGGTTTTGAATCAGATCCCAAAGTAAAGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGTTTGCAAAGTTCTAAAGAAATGAGACCTTATATGGATGAAGTGTTGGAAACTTTAAAAGATATTCAGAGTGATGGTAAGCATAAAAGTCAACCTGAGGTATTGGACATTTCAAGCTCAGCTGATGATGCTGTGTTGTTGAATCATGATCCACCTCCACTATCACCTGATTCAAATGTTGTGAGCAATTCTACAATATCGAATGCTAGTGGATAA 2214 0.355 MSPPLLLPPFSFIIKTFIFLPLFFLIPTYTTSDVESYTYCAPFSCGNLTNISYPFWNINNQPSYCGHPNFTLHCQHNNLTIEINSQKFHIIDINQTSQILKIAKLDLWSYDATTTYSCPKQYNINLDSNFFKYTSNDKNYTLLYECDPLPNPYSSPLSPKVFQKISCLIDGKPQDAYLVSSDKLIDFIAMNCKNSIIVPSLKSSLNEDSNILEEGFEIGWSDMEEDICDGCVKSSGRCGYNVSQNEVMCLCPNSQYFDDCGICNMKSKTKIWMDNYDCKRSRLYKSMAPSPLGEPIHGKTPSNGFTPSHAIVPSYVPNSKDSSDSSSSLDWKLKFVIGVASAVLGALAMTSFIYFYKRRKNSSYAKSYIQSHNLSSDISSKDPEMGSQHFGRSQNFGVQHFNYSELEEATNHFDPSKELGEGGFGTVYFGKLHDGRCVAVKRLYENNYKRVEQFMNEVKILARLVHPNLVSLYGCTSRHSRELLLVYEYVSNGTVADHLHGKQAKHGKLSWPIRMNIAVETASALKYLHVSDIIHRDIKTNNILLDAHFRVKVADFGLSRLFPMDHTHVSTAPQGTPGYVDPDYHQCYQLTEKSDVYSFGVVMIELISSLPAVDITRHRHEINLANMAINRIQNQALHELVDPTLGFESDPKVKKMINAVAELAFQCLQSSKEMRPYMDEVLETLKDIQSDGKHKSQPEVLDISSSADDAVLLNHDPPPLSPDSNVVSNSTISNASG 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01675 737 ProSiteProfiles Protein kinase domain profile. 413 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01675 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Car08g01675 737 Pfam Wall-associated receptor kinase C-terminal 188 253 IPR032872 -
Car08g01675 737 SMART serkin_6 413 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01675 737 SUPERFAMILY Protein kinase-like (PK-like) 395 717 IPR011009 -
Car08g01675 737 MobiDBLite consensus disorder prediction 721 737 - -
Car08g01675 737 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Car08g01675 737 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 726 IPR044652 -
Car08g01675 737 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Car08g01675 737 Pfam Protein kinase domain 416 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01675 737 Gene3D Transferase(Phosphotransferase) domain 1 490 701 - -
Car08g01675 737 MobiDBLite consensus disorder prediction 689 737 - -
Car08g01675 737 Gene3D Phosphorylase Kinase; domain 1 386 489 - -
Car08g01675 737 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 15 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01675 Car-Chr8 26576011 26587309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01675 332 691 Receptor kinase-like Gene Family AT1G25390 59.341 7.65e-142 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car08g01675 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01675 - - cam:101492618 1472.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01675 08 26576011 26587309 Car08g01675 08 26576011 26587309 ECH