Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01671 ATGCCAGTTTTCATTTTTATATGTAACTGTTTTTCCCATAATGCAAATAAAAGGAAAAACAGCCCTTCAATACCAAAGGATTTAGAGGAGAATGGTACTAACAATTTGGTTGTGCCAGTGAGTTCAAAGAAACCAATTATTGTGGATTCTAAGGTTACTACTAGTAGTTGTAATGAATCAATTTCTGTGAATGTGATTTCTGAGTTACAAAGTAATCATGTTGGTCAATCTATTTTGGTTGATTCTGAGGGGCAGAACAATGAATGCAACATCGGTGAGTGTGAGATCTTTAAGTATTCTGAACTTGAAAAAGCTACAAACAACTTTGATTCTAGTAGAGTACTTGGGAGTGGAGGCTATGGAACAGTTTACTCTGGAACACTTAAAGATGGGCGTCTTGTTGCAATAAAGCGCTTGCATGAAGACAAGTTCATGATCTTAAGGTTACATGACAACAAACTTGAGGAAGAGAGACAAAGAAAGTTCATCAATGAAGTTGCAATGTTAACTCGCTTGAGGCACGAAAATCTGGTTCACCTGTACGGCTGCACCTCTCCTAAAACACGCGAACTACTTCTTGTGCAAGAATACATTCCCAATGGAACCGTGGCTGATCGTCTTCACAGATACACCTTCCCGTGGTCTACTCGACTAAATGTCGCTGTACAAACCGCTAGTGCACTGGCTTATCTTCACGCGTCAAATATCAtacaccgtgatgtgaaaacatgtaatattctacttgacagaagtttgaatgctaaagttgcagactttggtttgtcgcgccttgttccacacggcgctacacacatttcaaccaatcctgcaggaactcgaggttatatcgatccagaatatattgaacttggtcatctttctgataaaagtgatgtatacagctttggagtggtattgattgagttgATATCATCTTTGCCTGCATTTAGCAAAGATGAAGAACAACCTTTTCTTTCGGATTTCGCCATGGAAAAACTCCTTGGAGGACAACTCGAAAAGGTTGTCGACCCAAATCTTGGATTTGGGTCAGACAAGTGGATAAGTGAAACAATAAGTGCAGTATCAGAGCTGGCATTTGGTTGTCTACAACCTCAAAGAAACATGAGACCTTCCATGGCTGAGGTTTTTAATACTCTTGACAGCATTAATAGTGGAAGCTCTCAAATTTCTCTTAAATTGAGTTCAAATCATTGTTACAATGCCACCAAAATTCACATTGTGTCGCGCTTGCCTGATGATTATTTCGAGAAGAAATAG 1278 0.3255 MPVFIFICNCFSHNANKRKNSPSIPKDLEENGTNNLVVPVSSKKPIIVDSKVTTSSCNESISVNVISELQSNHVGQSILVDSEGQNNECNIGECEIFKYSELEKATNNFDSSRVLGSGGYGTVYSGTLKDGRLVAIKRLHEDKFMILRLHDNKLEEERQRKFINEVAMLTRLRHENLVHLYGCTSPKTRELLLVQEYIPNGTVADRLHRYTFPWSTRLNVAVQTASALAYLHASNIIHRDVKTCNILLDRSLNAKVADFGLSRLVPHGATHISTNPAGTRGYIDPEYIELGHLSDKSDVYSFGVVLIELISSLPAFSKDEEQPFLSDFAMEKLLGGQLEKVVDPNLGFGSDKWISETISAVSELAFGCLQPQRNMRPSMAEVFNTLDSINSGSSQISLKLSSNHCYNATKIHIVSRLPDDYFEKK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01671 425 ProSiteProfiles Protein kinase domain profile. 109 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01671 425 SMART serkin_6 109 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01671 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Car08g01671 425 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 36 396 - -
Car08g01671 425 Gene3D Phosphorylase Kinase; domain 1 79 197 - -
Car08g01671 425 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 36 396 IPR044652 -
Car08g01671 425 SUPERFAMILY Protein kinase-like (PK-like) 91 386 IPR011009 -
Car08g01671 425 Gene3D Transferase(Phosphotransferase) domain 1 198 409 - -
Car08g01671 425 Pfam Protein kinase domain 111 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01671 425 ProSitePatterns Protein kinases ATP-binding region signature. 115 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01671 Car-Chr8 26547669 26551053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01671 96 389 Receptor kinase-like Gene Family AT1G25390 53.642 8.99e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car08g01671 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01671 - - mtr:MTR_6g082700 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01671 08 26547669 26551053 Car08g01671 08 26547669 26551053 ECH