Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01651 ATGAACGAATTTGCACTAATCCACAAACGCGAAGCCGATTCAGAAAACAAAGATGAAATTTCTGCATCGAAAAAGTCAAGGGTTGAATCTTCGGAAGAGAATGCTTCAAAGGAAGTAACTTTTTTCCGCATTGAAGCTGATGCAGCTGAAGATAAAGGATTGAGACATACAATGGAGGATGAATGGGTTGTGCTTCTCAATGCAGCTCTAGATTACCCTGGAAATTTGAGATGTGCTCACTTTGCAATTTATGATGGACACGGGGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGGAAATGTTCTTGCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGACCGCTAAAAGATCTATACTTGATGGTTTTCGTAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCTGAAGGAGGATGGCAGGATGGTGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTTGCAAATGTCGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACTATATCTGATGGATCCCAAGATAACTCAAATGGAGTCCCTGCTCTCAAGGCCATTGTTTTGACCAGAGAACACAAACCTATATTCCCACAGGAGCGTACACGCATTCAGAAGGCTGGTGGTATTGTGAGCTCAAATGGACGATTACAAGGACGACTAGAAGTCTATAGGGCTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTCTTGTTGCAACCCCAGATATCCACTCCTTCGACCTAACTGATAGAGATAATTTCATCATTCTAGGTTGTGATGGCTTGTGGGGGGTATTTGGTCCTAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGACTGCCTGTAACAACTGTGAGCCGCCGTCTTGTAAAGGAAGCTGTCCGTGAGCGTCGCTGCAAAGATAACTGCTCTGCAATTGTCATCGCATTCAAGCGAAATTAA 969 0.4345 MNEFALIHKREADSENKDEISASKKSRVESSEENASKEVTFFRIEADAAEDKGLRHTMEDEWVVLLNAALDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLAAGLPRELLDVKTAKRSILDGFRKTDESLLQESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTISDGSQDNSNGVPALKAIVLTREHKPIFPQERTRIQKAGGIVSSNGRLQGRLEVYRAFGDRQFKKVGLVATPDIHSFDLTDRDNFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVTTVSRRLVKEAVRERRCKDNCSAIVIAFKRN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01651 322 Pfam Protein phosphatase 2C 49 307 IPR001932 -
Car08g01651 322 CDD PP2Cc 49 319 IPR001932 -
Car08g01651 322 SUPERFAMILY PP2C-like 41 320 IPR036457 -
Car08g01651 322 PANTHER PROTEIN PHOSPHATASE 2C 13 316 IPR015655 GO:0004722|GO:0006470
Car08g01651 322 ProSiteProfiles PPM-type phosphatase domain profile. 45 319 IPR001932 -
Car08g01651 322 Gene3D - 20 322 IPR036457 -
Car08g01651 322 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 13 316 - -
Car08g01651 322 SMART PP2C_4 39 317 IPR001932 -
Car08g01651 322 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01651 Car-Chr8 26331833 26336782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01651 36 271 PP2C-type Phosphatase Gene Family AT1G18030 74.153 1.66e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01651 K17500 - mnt:21396468 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01651 08 26331833 26336782 Car08g01651 08 26331833 26336782 ECH