Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01625 ATGACACCACGCACCGATGACTACGAACAAGACAACGATAACCTTTCCGCCACcgactgcgacgacgatgacgacgactacgGTCTCAAAGAAGATATGGCTGCTCTCGCGCGAGCTTGTATGGTCACCGGAGATGAAATTCCGCCTCCGGAAGATCCACTTTTGGCCTCCGGTGACGCCATTGTCCCTTTCACCGTCACTGCCGACTCCGACGAAGATGAACAGAGTGATCTAGAATGTCTCAAGAGAGTGCAGAGTCTTTACCAGCCTCCGGATTCTCTTCCTACGCCGCAGATAGGCCTGTCCGACGACGATGAAGACGACTTTGAAACAGTTCGCGCCATTTTCAAACGGTTTTCTGCTTACGACGGAGGTAGGGAAGCATGGGCTGAGGGGGGTCAGGCCCCAAGTTTAATCAGTGAGCAGGAAGTTGCCAAGAGCTCCATCTCTGACAAATCAGATGATGGTGAATTGTGTCCTGATTCTCAATACCATGATAATGACACCAAATTGCTGACTGAGACATGTGGCTTTGACGAGACTTGTGAAGATGATGCCACTGCCAGCTTGTCTTCCAAATTACCGAAGAACAGATCAAGCTTTCCTCCGTCGGCTCAAGCTTTTATTGATGCTGTCAAGAAGAATAGAGCTCTCCAGAAATTTCTTAGAAGTAAGTTGATTGAAATTGAAGCAAAAATTGAGGAAAACAAAAAGATAAGAGACAAAGTTAAACTCCTTAAGGATTTCCAGGTTTCATGCAGTAGAAAAACGGGGAATGCTTTATCACTGAAAAAGGACCCGCGTGTGCAGTTAATATCTTCCAAGAAATCCATTGCAACAAATAAATCAAAGAGCCATAATAAGAAAGTTTCTGCTATGTGTTATGGCCCAGAGGAGAATTCTCGTGTTGCTAACTATAAGATGGTATTGGAAAGATTTCCGCTTTCATTGGATCGGAAAAAATGGTCAAATAAGGAAAGGGAAAATCTTTCGAAAGGAATTAAGCAACAATTCCAAGAAACAGTGCTTCAAATTTCAGTAGATAGAATGAGTTCAGAGTGCTCGCCTGGAGATGCAAATGACATGGATAGCATAATTGAATCAGTTAAAGGTCTTGACATCACACCAGGGAGGATTAGAGAATTTTTACCTAAAGTTAATTGGGATCGATTGGCTTCTATGTATGTTACTGGCCGTACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTGTGAAGATCCTCTGATCAACCATGACCCATGGACTGGTGAAGAGGATAGATCTCTTTTGATTATTATCCAAGAGATAGGCATCAGGAACTGGTTTGACATTGCTGTATCTTTGGCCACAAACAGGATTCCATTTCAATGCTTGGCACGATACCAGAGGAGCTTAAATCCTTCAATGTTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTCTGCTGTTGCATGTTTTGGTGAGAGTAATTGGCAGTCTGTGGCTTCTGTTTTAGAACGACGGGCGGGAACCCAGTGCTCAAATAGATGGAAAAAATCGCTTTGTCCTGTGAGGAAAGGGAGCTTTACTCCCGAGGAGGATAAACGCCTTACAATTGCAGTCATGCTGTTTGGACGAAAATGGAATCAAATAGCTAAATTTGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTTAATAGTTTGGATCCTTCTTTGAAATGGGGTGGATGGACTGAGGAAGAGGATTTAAGATTAGAAGCTGCAATCACTAAGTATGGATATTGCTGGTCTAAGGTTGCTGAAGATGTGCCTCCCCGCACTGATTCTCAATGCCGGAAGAGATGGAAGGTGATATGTCCTGAACAAGTTTCTCTGCTTCAAGAAGCAAGAAAGAGGCAAAAGTCTCTTCTTGCCTGTAACTTTGTCGATCGAGAATCTGAACGTCCAGCCATTACATTGAATGACTTTATTCCTTTACAAATGGTAGCTCCATCATCTGACGTTAGTGCTGAGAATCTCCAAAGGAAACGGAAGAGAAAATCGAGTGTTCACAATAAAGAGAGGTCCAAAAAACATGCAGAAGACGCTGAACTTTGTCCCGAGGAAGTTCAAGATGCAGTTCCCAAGAGAGAGAGGCCCAAAAGACATGCAACAAAGGCATCAATTTTTTCCGAGGAAGTACAAGATACAGTTCCCAAGAAAGAGAAGCCTAAACGACAATCAAAAAAAGCTCGAATTTGTCCCGAGGAAGTACAATATATAGCAGCTTATGGTGCTAAGGTTAAGACTTGTGGTGGAGGTGTTCCATTCTTTGCACAGAACAATGTTCCCAAGAAAATGAGATCTAAAAGATGTGCTAAAAAGGCTCCAATTCATCCTGAGAAGGTAGAGAATATAGGATGCAGTGACAAGGTCAAGGTCTGTATCGAGTCCAAAAGTCAAGATGGGGACAACATAACACTTGCATGCTTTTTGCGCAACAAATCAAAGAGAGTCAAGAGACTAAGTAAACGTACCAAAAATGAGAACCAGACTTCATCTTCCTCTAGGAAGAAAATTGTATCTAAGCAGGTTGAAAATCAAATACCATCTGATGATCAAGGCGGGTTTTCTCTGCCGTGTGGTATTGGTGGAACTCAAGATTTGTTAGTGTCTAAGGAAGTTGCTTCTAGCAGACAAGTAAAAAAACCAGAAGATGCAAATGCAGCTAGAAAATCAGAAGATGCACACAATTTGATTGGTGACGACGATGACGATATGACTCTCAATTGCTTTGTGAGAAACAAAACAAATAAATTGAGTCAAACTACTAAAAGACGCCGTGCTAGTTCTTCCTCCAAATCGAAAAAAGGAACTATATTACTCCATGGAAACAAGCCAACCCTGATTTCTGACGGCAGTGAACCATCCTTGTCAAAAGTTGTTGAAGAGGAGACTGTTTTACATGGTGGTGTGGCTGAATCTGAACCCATAAACATGAATGTGGTTGAAGACAAGACTATTTTGCATGGCAGCGTGGCTGAAGCTGAACCCACAAACATCAACGTGGTTGAAGAGGAGTCTGTTTTGCACAATGGTGTGGCTGGTGCTGAGCCCACAAACATCCATGTGGAAGAAGAAGATGACCTGCTTCTTTCCTTCCTGCAAAACAAGACAAGGAGACGGAAAAGGCTGACACAATATTCGTAA 3186 0.4228 MTPRTDDYEQDNDNLSATDCDDDDDDYGLKEDMAALARACMVTGDEIPPPEDPLLASGDAIVPFTVTADSDEDEQSDLECLKRVQSLYQPPDSLPTPQIGLSDDDEDDFETVRAIFKRFSAYDGGREAWAEGGQAPSLISEQEVAKSSISDKSDDGELCPDSQYHDNDTKLLTETCGFDETCEDDATASLSSKLPKNRSSFPPSAQAFIDAVKKNRALQKFLRSKLIEIEAKIEENKKIRDKVKLLKDFQVSCSRKTGNALSLKKDPRVQLISSKKSIATNKSKSHNKKVSAMCYGPEENSRVANYKMVLERFPLSLDRKKWSNKERENLSKGIKQQFQETVLQISVDRMSSECSPGDANDMDSIIESVKGLDITPGRIREFLPKVNWDRLASMYVTGRTGAECESRWLNCEDPLINHDPWTGEEDRSLLIIIQEIGIRNWFDIAVSLATNRIPFQCLARYQRSLNPSMLNSEWTEEEDAQLCSAVACFGESNWQSVASVLERRAGTQCSNRWKKSLCPVRKGSFTPEEDKRLTIAVMLFGRKWNQIAKFVPGRIQSQCRDRYLNSLDPSLKWGGWTEEEDLRLEAAITKYGYCWSKVAEDVPPRTDSQCRKRWKVICPEQVSLLQEARKRQKSLLACNFVDRESERPAITLNDFIPLQMVAPSSDVSAENLQRKRKRKSSVHNKERSKKHAEDAELCPEEVQDAVPKRERPKRHATKASIFSEEVQDTVPKKEKPKRQSKKARICPEEVQYIAAYGAKVKTCGGGVPFFAQNNVPKKMRSKRCAKKAPIHPEKVENIGCSDKVKVCIESKSQDGDNITLACFLRNKSKRVKRLSKRTKNENQTSSSSRKKIVSKQVENQIPSDDQGGFSLPCGIGGTQDLLVSKEVASSRQVKKPEDANAARKSEDAHNLIGDDDDDMTLNCFVRNKTNKLSQTTKRRRASSSSKSKKGTILLHGNKPTLISDGSEPSLSKVVEEETVLHGGVAESEPINMNVVEDKTILHGSVAEAEPTNINVVEEESVLHNGVAGAEPTNIHVEEEDDLLLSFLQNKTRRRKRLTQYS 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01625 1061 SUPERFAMILY Homeodomain-like 519 614 IPR009057 -
Car08g01625 1061 ProSiteProfiles Myb-like domain profile. 466 517 IPR001005 -
Car08g01625 1061 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 21 944 - -
Car08g01625 1061 MobiDBLite consensus disorder prediction 840 866 - -
Car08g01625 1061 MobiDBLite consensus disorder prediction 666 743 - -
Car08g01625 1061 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 466 517 IPR017930 -
Car08g01625 1061 MobiDBLite consensus disorder prediction 930 951 - -
Car08g01625 1061 SMART sant 572 620 IPR001005 -
Car08g01625 1061 SMART sant 470 519 IPR001005 -
Car08g01625 1061 SMART sant 417 467 IPR001005 -
Car08g01625 1061 SMART sant 521 569 IPR001005 -
Car08g01625 1061 SMART sant 318 414 IPR001005 -
Car08g01625 1061 MobiDBLite consensus disorder prediction 1 26 - -
Car08g01625 1061 CDD SANT 576 615 IPR001005 -
Car08g01625 1061 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 568 622 IPR017930 -
Car08g01625 1061 ProSiteProfiles Myb-like domain profile. 413 465 IPR001005 -
Car08g01625 1061 SUPERFAMILY Homeodomain-like 449 517 IPR009057 -
Car08g01625 1061 MobiDBLite consensus disorder prediction 886 910 - -
Car08g01625 1061 Pfam Myb-like DNA-binding domain 525 584 - -
Car08g01625 1061 Pfam Myb-like DNA-binding domain 421 482 - -
Car08g01625 1061 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 520 567 IPR017930 -
Car08g01625 1061 MobiDBLite consensus disorder prediction 686 743 - -
Car08g01625 1061 Gene3D - 419 469 - -
Car08g01625 1061 Gene3D - 472 520 - -
Car08g01625 1061 CDD SANT 524 567 IPR001005 -
Car08g01625 1061 Gene3D - 574 619 - -
Car08g01625 1061 MobiDBLite consensus disorder prediction 890 910 - -
Car08g01625 1061 MobiDBLite consensus disorder prediction 12 26 - -
Car08g01625 1061 ProSiteProfiles Myb-like domain profile. 521 567 IPR001005 -
Car08g01625 1061 Gene3D - 521 573 - -
Car08g01625 1061 MobiDBLite consensus disorder prediction 832 869 - -
Car08g01625 1061 Gene3D - 318 414 - -
Car08g01625 1061 SUPERFAMILY Homeodomain-like 394 448 IPR009057 -
Car08g01625 1061 CDD SANT 473 517 IPR001005 -
Car08g01625 1061 ProSiteProfiles Myb-like domain profile. 568 618 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01625 Car-Chr8 25928653 25935389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01625 163 749 MYB-Related Transcription Factor Family AT3G18100 46.635 2.25e-179 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car08g01625 Myb_DNA-bind_6 8.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01625 K09422 - gmx:100818474 1088.94