Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01610 atgcaaactcaaactcaaattcaaattcaaatgcaaattcaaattAAGTTTCATttctccttctttttctttttccttattactattcttcttcCTTTTGTAAAACCTGACCTCACTTCCGAACGCGCCGCTCTCTTAACTCTACGCGCCGCCGTACGCGGCAGAACCCTACTCTGGAACACCACCGTCGCCACTCCCTGCAACTGGTCCGGCGTAAAATGCGACCAAAACCACACTCACGTTGTTCAGCTTCACCTCCCTGCCGTCGCACTCTCCGGCGAACTTCCCGCCGGCGTATTCTCCGACCTCCCTAACCTCCACACTCTCAGCCTCCGCTTCAATTCTCTTTCCGGTCCTCTCCCCTCCGACCTCGCCGCATGCACCTCACTACGTAACCTCTACCTCCAGCAGAATTTTCTCTCCGGCGAAGTTCCGGCGACATTCTTCCGTCTGACAAGTCTCGTCCGTCTCAATTTGGCTTCCAATAACTTCTCCGGTCAATTTCCGGTAGGGTTCACGAACCTAACCCGGTTGAAAACCCTATATTTACAAAACAACCGGTTCACTGGTTCTTTAAGTGAGATGAACCGGGTTCAACTCGCTCAGTTCAATGTTTCAAACAACATGCTAAACGGTTCAGTTCCTGAAAAGTTGCAAACTTTTGGTAAAGATTCATTTTTGGGTAATTTCTTATGTGGAAAACCACTTAACCCTTGTGGGGGTGCAAATAGTGGAAATGGAAAACAAAACGGTGCAAATAGTAATTCAAGTGTTGTTGATGAAAATCAAGGGTTTGTGAAGAACAATAAGAGAAGAAAATTATCTGGTGGTGCTATAGCTGGAAttgtaattggttctgttgttgttcttttgtttgttgtttttgctttgattcttcttTGTAGGAATAGGAATGGTGAAAAGACAAGTTCAATTGATGAAGTTGCAGCTACTTTGAAGCATAACCAACATGGTGAAGATGGAATTGAGATTGAGAATGTtggaattggaaatggaaatggaaatggaaatgaaaatgaaaatggGTTTTCTTCGACCTCGGCCGTGACGGTGGTGAATGGTGGTAGGGAGAAAAAATTGATTTTTTTTGGGAATTTTGGGAAGGTGTTTGATTTGGAGGATTTGTTAAGAGCTTCTGCTGAGGTATTAGGGAAAGGGACATTTGGGACATCTTATAAGGCAGTTTTGGAGGTTGGTCCTTTGATGGTGGCTGTGAAGAGGTTAAGGGATGTGAGTATTAGTGAAAGGGAATTTAAGGAGAAGATTGAGAGGGTTGGTGCAATGGTTCATGAAAATTTGGCACCTCTTAGGGCTTACTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGTCTATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGGGGGCAGGACACCACTGAATTGGGAAATGAGATCAAGCATTGCACTCGGAGCTTCTCGCGGCATCGAGTATTTACATTCACAAGGGCCTAATGTTTCTCATGGAAACATAAAGTCATCTAACATCCTATTAACCAAAACATATGATGCAAAGGTTTCTGATTTTGGTCTTGCACACCTCGTTGGTCCTTCACCCACACCCAACAGGGTTTCCGGCTACCGCGCTCCTGAGGTTACCGATCCTCGAAAAGTTTCTCAGAAGGCTGATGTGTACAGTTTTGGTGTATTGCTCTTGGAACTCTTAACCGGAAAGGCTCCAACTCACGCTGTGTTGAACGAGGAAGGAGTGGACCTTCCTAGATGGGTGCAATCGGTTGTTAAAGACGAGTGGACTTCTGAAGTCTTTGATCTTGAACTCCTTAGGTATCAAAATGTCGAAGACGAAATGGTTCAGTTGTTGCAACTTGCTGTAGATTGTGCTGCCACATACCCCGATAACCGCCCTTCGATATCTCAAGTGAGACATCACATAGAAGAGTTGCATAGATCTAGCTTGAAAGAGAGTCAAGACCAAATTCAACAACCTGATTTCATCAATGACTTTGACGATATCGCTTCTCGATGA 2046 0.4106 MQTQTQIQIQMQIQIKFHFSFFFFFLITILLPFVKPDLTSERAALLTLRAAVRGRTLLWNTTVATPCNWSGVKCDQNHTHVVQLHLPAVALSGELPAGVFSDLPNLHTLSLRFNSLSGPLPSDLAACTSLRNLYLQQNFLSGEVPATFFRLTSLVRLNLASNNFSGQFPVGFTNLTRLKTLYLQNNRFTGSLSEMNRVQLAQFNVSNNMLNGSVPEKLQTFGKDSFLGNFLCGKPLNPCGGANSGNGKQNGANSNSSVVDENQGFVKNNKRRKLSGGAIAGIVIGSVVVLLFVVFALILLCRNRNGEKTSSIDEVAATLKHNQHGEDGIEIENVGIGNGNGNGNENENGFSSTSAVTVVNGGREKKLIFFGNFGKVFDLEDLLRASAEVLGKGTFGTSYKAVLEVGPLMVAVKRLRDVSISEREFKEKIERVGAMVHENLAPLRAYYYSRDEKLLVHDYLSMGSLSALLHGNKGGGRTPLNWEMRSSIALGASRGIEYLHSQGPNVSHGNIKSSNILLTKTYDAKVSDFGLAHLVGPSPTPNRVSGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHAVLNEEGVDLPRWVQSVVKDEWTSEVFDLELLRYQNVEDEMVQLLQLAVDCAATYPDNRPSISQVRHHIEELHRSSLKESQDQIQQPDFINDFDDIASR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01610 681 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 18 681 - -
Car08g01610 681 SUPERFAMILY Protein kinase-like (PK-like) 388 659 IPR011009 -
Car08g01610 681 Pfam Leucine rich repeat 129 188 IPR001611 GO:0005515
Car08g01610 681 Gene3D Transferase(Phosphotransferase) domain 1 460 678 - -
Car08g01610 681 ProSiteProfiles Protein kinase domain profile. 384 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01610 681 Gene3D Ribonuclease Inhibitor 200 240 IPR032675 -
Car08g01610 681 PANTHER OS05G0588300 PROTEIN 18 681 - -
Car08g01610 681 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Car08g01610 681 Pfam Protein kinase domain 387 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01610 681 Gene3D Phosphorylase Kinase; domain 1 362 459 - -
Car08g01610 681 Gene3D Ribonuclease Inhibitor 38 198 IPR032675 -
Car08g01610 681 SUPERFAMILY L domain-like 59 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01610 Car-Chr8 25624842 25628255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01610 37 670 Receptor kinase-like Gene Family AT1G48480 56.154 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car08g01610 Pkinase 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01610 - - gsj:114425465 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00144 06 1753651 1756824 Car08g01610 08 25624842 25628255 PCT