Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01607 ATGTGTTGCAAACCTGGTTGGTTTTGGTGCATCTATTGCACAATTTCCTCAGTCGTGTTATTCGGCTTTATTTCTTCAATAATTTTTTGGATAGTAATTTCTCCCTCAAGTGTGAAGTTCTATGTAACGAACGTTGCTCTTACAGAATTTAACTTGACAAACAACAATTTATATTATAATTTCAAACTCAACATCACCGCGAGAAACCCCAACAACAACATCGTCGTGTACTATCGAAGAATCATCGCAATTGCTTGGTACAAAGACAACGAATTTAGTTACGTGAGTTTGGCACCCTTTGATCAAGGACACAAGAATACTACTTTTCTCGGGCCGATAGTGTTTAAAGGGAACAATATGATAAAACTTGGTCGTAAACAACTTGATGAGTATAGCGAAGAGACCCGTTTGGGAATTTATGAAGATTTGGCTGTTGATTTGGATGTTCGAATTCGAGCTAAGTTTGGAAGGTTTAGAAGTGGTCGTTTTAATCCACCAGTTGTTCAATGTCGTCGTTTGAGAATTCCTTTGATTTCTTCTTCCAATGTTAACTCATCATCAACACATACTTTTAGTAACAAAAGATGTAGCAGCGGTTCTTTCTTTACAGATCGTGATGCAGATGCAGGAGATTGA 636 0.3742 MCCKPGWFWCIYCTISSVVLFGFISSIIFWIVISPSSVKFYVTNVALTEFNLTNNNLYYNFKLNITARNPNNNIVVYYRRIIAIAWYKDNEFSYVSLAPFDQGHKNTTFLGPIVFKGNNMIKLGRKQLDEYSEETRLGIYEDLAVDLDVRIRAKFGRFRSGRFNPPVVQCRRLRIPLISSSNVNSSSTHTFSNKRCSSGSFFTDRDADAGD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01607 211 Pfam Late embryogenesis abundant protein 64 163 IPR004864 -
Car08g01607 211 PANTHER HARPIN-INDUCED 1 17 202 - -
Car08g01607 211 PANTHER OS05G0367900 PROTEIN 17 202 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01607 Car-Chr8 25596234 25597066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01607 32 189 SNARE and Associated Proteins AT1G32270 30.818 8.82e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01607 - - mtr:MTR_6g070890 317.39