Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01606 ATGAGCTTCAAACCTTGTTACAATGTGTTTTGCACCTATTGCACGATCTACATTCTTATGATCTTGTTCTTTCTTTTCTTCATCATCCTCTCAATAATCATCTCCCCTTCGAATATCAAGTTTCATATAACCGATGTTTCCCTCACAAAGTTCAATCTCACAAGTGACAACATCTTATATTATAATTTCAAAGTCAACATCACAATAAGAAACCCGAACAATAATGTCATAGTATATTATAGGAAGATCAATGCAATTGCTTGGTACAAAGATAATGATTTTGGCTATGTGAGTTTGACACCCTTTGACCAAGGTCATAAGAATACCACTTTTCTCAATCCAATAGTGTTTGAAGGAAATAGTGTGATCAAACTCAAACGTCAACAACTTGATGAGTATAACGACGAGACAAGTTTAGGAATTTACAATGATTTGGCTGTTGATTTGAATCTTCGAATTAGATTTAAGTTTGGTAGAATTAAGAGTAGTCGTTTTGATCCACCAATCGTACAATGTCGTCATTTGAGAGTTCCTTTAATTTCAAATGGCAAAGATTTAGCAGACTCAACACATCCTTTCAACGGTACAAAATGTAAAACTTATTATTTCTTTGCACATGATTCAGGAGACCGATTTTGA 639 0.338 MSFKPCYNVFCTYCTIYILMILFFLFFIILSIIISPSNIKFHITDVSLTKFNLTSDNILYYNFKVNITIRNPNNNVIVYYRKINAIAWYKDNDFGYVSLTPFDQGHKNTTFLNPIVFEGNSVIKLKRQQLDEYNDETSLGIYNDLAVDLNLRIRFKFGRIKSSRFDPPIVQCRHLRVPLISNGKDLADSTHPFNGTKCKTYYFFAHDSGDRF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01606 212 PANTHER HARPIN-INDUCED 1 18 202 - -
Car08g01606 212 PANTHER OS05G0367900 PROTEIN 18 202 IPR044839 GO:0098542
Car08g01606 212 Pfam Late embryogenesis abundant protein 66 161 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01606 Car-Chr8 25592743 25593381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01606 33 179 SNARE and Associated Proteins AT1G32270 30.405 8.44e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01606 - - gmx:100784278 265.774