Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01601 ATGGAATCTAAGAGGAATAGTTTTGATGATGGTGATaacaagtacaaagaacatcaacaacaagaatttgaacaagaacaagaaGGTGGTGTTCATCCTGAAGAGGAAAATAATGAGATTCTTAAAAGAAGAATCTCTTCTCATCCTCTTTATCAATTTCTTGTTGAAGCTCACTTGGATTGtttgaagGTTGCTGACATTTCTAACTTGGAGATAGAGCTAAAGAAAAATCAAAAGCAAGCAATGAAGAAACAAAACTTGGATTTGTTCAGCCAAAGTGAGCTTGATCTCTTCATGGAAGCTTATTGCTTGGCTCTTAGTAAGCTAAAAGAAGCAATGGAGGAACCACAACAAAATTCAATGGCTTTCATAAACAATATGCATTCACAACTTAGGGAGCTAAGTAAAGCAACTACACCTTCATCTTCTGAACAAGCTGCATCTTCAAGTGAGTGCACATTTAGAAGAAACCCAACAATTTAG 483 0.323 MESKRNSFDDGDNKYKEHQQQEFEQEQEGGVHPEEENNEILKRRISSHPLYQFLVEAHLDCLKVADISNLEIELKKNQKQAMKKQNLDLFSQSELDLFMEAYCLALSKLKEAMEEPQQNSMAFINNMHSQLRELSKATTPSSSEQAASSSECTFRRNPTI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01601 160 Coils Coil 67 87 - -
Car08g01601 160 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 20 136 - -
Car08g01601 160 MobiDBLite consensus disorder prediction 1 36 - -
Car08g01601 160 MobiDBLite consensus disorder prediction 133 160 - -
Car08g01601 160 Pfam KNOX1 domain 41 65 IPR005540 GO:0003677|GO:0005634
Car08g01601 160 SMART KNOX2_2 85 136 IPR005541 GO:0003677|GO:0005634
Car08g01601 160 Pfam KNOX2 domain 92 134 IPR005541 GO:0003677|GO:0005634
Car08g01601 160 PANTHER FUSED COMPOUND LEAF 1 20 136 - -
Car08g01601 160 SMART KNOX1_2 39 81 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01601 Car-Chr8 25500532 25505248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01601 39 137 Homeobox Transcription Factor Family AT4G08150 35.238 5.78e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01601 - - mtr:MTR_6g071190 202.986