Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01599 ATGGCGCTCGTCCACCGCCGCCGCAACCCCAAACTCCGTCTCCCTGAAATAGCCGATCACCGTCCCCGCTTCCCTGTCCCCCTCCCTCCCAACATCTACAAACACCCCACCTCCTCCACCTCCGCCGTATCCGGCGGCGACCCACTTGCTCCCGGCGACCTCGAAAAACTCGCCGTCCTAGGCCATGGAAACGGCGGAACCGTCTACAAAGTCCGCCACAAACTCACCTCCGCCATCTACGCTCTAAAAGTCAACCACAACGACTCCGATCCCACCACACGCCGCCGTACACTCGCTGAAATCAACATCCTCCGACGCGCCTCCGATTGCCCCTATATTGTCAAATTCCACGGTTCATTCGAAAAACCCACCGGCGACATCGCGATTCTGATGGAGTTCATGGACTCCGGCACTCTCGAAACCAAACTCAAAACAAACGGCACGTTCTCCGAACCATCACTCGCTTCCGTGGCGCGTGACGTTCTAAATGGTCTCGCGTACCTCCACGCGCGTAACATAGCGCATCGTGACATTAAACCTTCGAACATCCTCGTAAACAACAAAAACGAGGTTAAAATCGCGGATTTCGGTGTTAGTAAATTCATGGGTCGCACGCTTGAAGCGTGTAACTCTTATGTTGGCACGTGTGCTTATATGAGTCCTGAACGGTTTGACCCGGAAGTTTATGGCGTTAATTATAACGGTTTTGCGGCTGATATTTGGAGTTTGGGATTAACCCTTTTTGAACTTTATGTGGGTCATTTTCCATTTCTTCAATCGGGTCAAAGACCCGATTGGGTTACACTTATGTGTGCGATATGTTTCGGCGACCCGCCGAGTCTCCCTAAGTCGGCTTCATCGGAGTTTCGGAATTTTGTTGATTGTTGTCTTAGGAAGGAATCCGGTGAGAGGTGGACGGCGGCTCAATTATTGACCCACCCGTTTTTGTGTAATGATGTAGAAACTTGTTAA 972 0.5165 MALVHRRRNPKLRLPEIADHRPRFPVPLPPNIYKHPTSSTSAVSGGDPLAPGDLEKLAVLGHGNGGTVYKVRHKLTSAIYALKVNHNDSDPTTRRRTLAEINILRRASDCPYIVKFHGSFEKPTGDIAILMEFMDSGTLETKLKTNGTFSEPSLASVARDVLNGLAYLHARNIAHRDIKPSNILVNNKNEVKIADFGVSKFMGRTLEACNSYVGTCAYMSPERFDPEVYGVNYNGFAADIWSLGLTLFELYVGHFPFLQSGQRPDWVTLMCAICFGDPPSLPKSASSEFRNFVDCCLRKESGERWTAAQLLTHPFLCNDVETC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01599 323 Gene3D Phosphorylase Kinase; domain 1 35 135 - -
Car08g01599 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Car08g01599 323 SMART serkin_6 54 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01599 323 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 3 318 - -
Car08g01599 323 CDD PKc_MAPKK_plant_like 53 316 - -
Car08g01599 323 Gene3D Transferase(Phosphotransferase) domain 1 137 322 - -
Car08g01599 323 SUPERFAMILY Protein kinase-like (PK-like) 51 319 IPR011009 -
Car08g01599 323 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Car08g01599 323 ProSiteProfiles Protein kinase domain profile. 54 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01599 323 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 318 - -
Car08g01599 323 Pfam Protein kinase domain 55 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01599 Car-Chr8 25477594 25478837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01599 1 320 MAP Kinase Kinase Gene Family AT1G73500 57.276 1.87e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Car08g01599 Pkinase 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01599 K20604 - gmx:100804100 514.998