Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01589 ATGCTTAAGAATCAGATTCCTGATCTTTCTCTTAACATTAGTCTCCCAAATAGTGCTCCTTCTTCAATTTGCACTAACAATACAAATGAAGGAGATTTAGATTCATCTTTTGATATATGGAAAAATATTGATGGTTATTTCAAATCTAATAGTGATGGTTCAACTTCAATCAAAGGTAGTAGTAATCTTCAAAAAGATACACAACTTTCATTATCAAATTCAAACCCTCCTTTTGAAGTTGAGAGTCCATGGAAGAGAAACTTTGTTGCAAGAAAGGAATTAACAAATTATGAGGTTTGTGATGAGAGTGAAATATTAAGAAGACCCTTCAATGGAATTCCTCTTTATAGTGGTAATAATTCATCAATAATAGAGAAAGATTCAAAATTTTCTCTATATGAAGTTCAAAATCCTTCTTGTGCTATTAATTCTTCAAATAATAGTTGTGAGGGTTTTAAGCAAATCTCAAGGTTTAATGGTATAACCATGGAGAGTTTAAGGTCTCAACAATTTCAATACTTGAACAACcatcatcatcatcagaaatatcataatcatcttctacaacaaaatcaATTTGGGAGTACTATTGGGAATTATGAATTTGGAAATGGATTTTTGAGGTCAAGATCAATGATGGCAAGGCAACAAAGTAATAAGAGGAACATGAGGGCTCCGAGAATGCGATGGACTAGCTCGCTTCACAATCGATTTGTTCACGCCGTTGAGCTTCTCGGCGGCCATGAAAGAGCAACTCCTAAATCAGTTTTGGAGCTAATGGATGTCAAAGATTTAACACTAGCTCATGTGAAGAGCCATTTACAGATGTATAGAACTGTTAAAAATACTGACAAGCCAGCAGCTTCTTCAGATGGAGATGAAAATTTCATGTCATTAACACCACCACATAATCAAAATAAGAACTATAATGTATCTCTAGATCATGATTTGGGCTACACTTCCAACAATTTATGGGCCAATTCTTCTTCAAGTAAAGGAACATGGACACAAAATGGATCACATGATTTTGATGAGTTTAGTACTCAAGAAATCCTATCTTCTCAGCACATTAATAATAAGCTTCCTCAGGGTATTGTGAGAAGCTTGAAGGATCAAAACATAGATGGTCAGATTCCAAATTTGGAGTTCACCTTAGGGAGATCAAATTAA 1170 0.3308 MLKNQIPDLSLNISLPNSAPSSICTNNTNEGDLDSSFDIWKNIDGYFKSNSDGSTSIKGSSNLQKDTQLSLSNSNPPFEVESPWKRNFVARKELTNYEVCDESEILRRPFNGIPLYSGNNSSIIEKDSKFSLYEVQNPSCAINSSNNSCEGFKQISRFNGITMESLRSQQFQYLNNHHHHQKYHNHLLQQNQFGSTIGNYEFGNGFLRSRSMMARQQSNKRNMRAPRMRWTSSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDENFMSLTPPHNQNKNYNVSLDHDLGYTSNNLWANSSSSKGTWTQNGSHDFDEFSTQEILSSQHINNKLPQGIVRSLKDQNIDGQIPNLEFTLGRSN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01589 389 Gene3D - 225 282 - -
Car08g01589 389 MobiDBLite consensus disorder prediction 53 76 - -
Car08g01589 389 Pfam Myb-like DNA-binding domain 227 278 IPR001005 -
Car08g01589 389 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 5 389 - -
Car08g01589 389 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 5 389 IPR044847 GO:0000976|GO:0006355|GO:0010158
Car08g01589 389 SUPERFAMILY Homeodomain-like 223 280 IPR009057 -
Car08g01589 389 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 226 279 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01589 Car-Chr8 25373475 25382909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01589 97 387 G2-like Transcription Factor Family AT5G16560 39.506 6.81e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car08g01589 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01589 - - cam:101493712 779.63