Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01582 ATGGATGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGTTTCATCATTTAAGAGTCACTTAGGGTTGCAGCTGATGTCGTCCATGCCGGAAAAACCGTTGCTTGGAGGGCATAATGCTGCAGTTTTGTCGGGTGGTAATGGTGCATTTCACCATAGAGATATTGGGTTACCTCAAACTACATATCCTATGGATTATATGAGGGATGCATGGATTAGTAGTCAAAGGGATAATAAGTATATGAATATGAATATGATACCTACAAATCCGGGTTATAGTGGTATTCCAGAGACATCTTCGGCTCATCATATTCAAATGATTCAACCACCGGAATTGTTGAAGGAAGAAAGGCCGACGGAGGATGCAGCACCGCCTGTGGTTGAGAAGACAAATGGAACTGGTAAGAAGAGGCAAGGACTGAAGGTGCCTAAATCTCCGAAAGCAAAGAAGCCGAAAAGAGGACCACGTGATCCAAAGGACGAGAATACTCGTTCGGTTCCTCGAACACCAAGGGTTCCTAAGAAAACAACTGAAATTGCGATAAATGGGATTGATTTGGATATTTCTAGTATTCCAATTCCTGTTTGTTCGTGCACCGGGACACCTCAACAGTGTTATAGATGGGGCTCGGGTGGATGGCAGTCTGCATGCTGTACAACGGCTATATCGATATATCCTTTGCCTATGAGTACTAAGCGGCGTGGTGCTAGAATAGCCGGTAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGTACCAACAAGTTTGTCACTATCAGGTAG 867 0.4291 MDGDNGLNIRNWGYYEPVSSFKSHLGLQLMSSMPEKPLLGGHNAAVLSGGNGAFHHRDIGLPQTTYPMDYMRDAWISSQRDNKYMNMNMIPTNPGYSGIPETSSAHHIQMIQPPELLKEERPTEDAAPPVVEKTNGTGKKRQGLKVPKSPKAKKPKRGPRDPKDENTRSVPRTPRVPKKTTEIAINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTAISIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01582 288 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 288 - -
Car08g01582 288 SMART GAGA_bind_2 1 288 IPR010409 -
Car08g01582 288 MobiDBLite consensus disorder prediction 116 181 - -
Car08g01582 288 PANTHER - 1 288 IPR010409 -
Car08g01582 288 MobiDBLite consensus disorder prediction 157 172 - -
Car08g01582 288 Pfam GAGA binding protein-like family 1 288 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01582 Car-Chr8 25175331 25177233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01582 1 288 BBR or BPC Transcription factor family AT2G01930 52.685 9.32e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Car08g01582 GAGA_bind 1.6e-106 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01582 08 25175331 25177233 Car08g01582 08 25175331 25177233 ECH