Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01577 ATGAATCCTTCTGAGCAATTTGTGGAACATGGAATATCTCAACAGAATTTAAAGAGGACATCTTGTGTAAATGTGCTTACTTTGGCTTACCAAAGTCTTGGAGTAGTCTATGGTGACCTTAGCACTTCTCCTCTTTATGTATACAAGACCTCATTCTCAGGGAAATTGAGCCTCAAAGAAGATGATGAGGAAATTTTTGGAGTGCTTTCATTTATTTTCTGGACATTTACCATTATTGCTCTCTTCAAATATGTTTTCATTATGATGTCTGCTGATGACAATGGGGAAGGAGGAACCTTTGCATTATACTCACTTCTCTGCCGACACGCGAGACTAAGCATTTTGCCTAATCAACAACCTACAGATGAGAATTTATCAGCTTATTCAACAGAAAATTCTGCAGATACATGGCAATCTTCTCTTTTGAAGCTGTTCTTTGAAAAGCACCCTAGGTTCCAGAAAGGACTTCTGATCTTTGTTCTGTTGGGAACATGTATGACAATTGGTGATGGTGTGATTACTCCTGCAATATCAGTATTTTCAGCAGTTTCAGGAGTTCAAGTTAAAATAAACCAACTCCATGACAATTACGTTGTTATAGTCTCATGTATCATTTTAGTTGGCCTTTTCTCCATTCAACATCATGGAACACATAGAGTTGCCTTCATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATATACAACATATTCCGATGGAACAGACAAGTATACCGCGCACTTTCTCCACTCTATATGTTGAGGCTTCTCAAAACCACTGGCATTGAAGGATGGTTGTCATTAGGTGGAGTGGTACTTTCAATCACAGGGGTGGAGACAATGTATGCTGACATGGGTCATTTTTCTGCACTCTCAATAAAGATAGCTTTCACATGTTTAGTATATCCCTGCCTAATTTTGGCATACATGGGTGAGGCTGCATTTCTCTCTAAGCATCATTATGACATTCAGAGAAaagctgtattttggccagtttttatagtggccacttttgctgctgttgtaggaagtcaagcagtgatttctgcaactttttctatcataagccagtgctgcgcattaaattgttttcctcacgtcaagattgttcatacttctagaaaaatatatggacagatttatattccagaaatcaattggatattaatgtgcctttgtttagctgtcacaattgGCCTAAGGGATACAAACATGATGGGTCATGCATATGGTCTGGCTATAACAACTGTTATGTTTGTGACAACATGCTTGATGACACTAGTAATCATCATTGTTTGGAAACAAGGGGTAATAAAAGCACTTACATGTTTACTATTGTTTGGATCTATTGAACTACTTTACATCTCAGCTTCTGTCTGCAAAGTCCATGAAGGAGGGTGGATCCCAATTTTGCTATCTTTCTTTATTATGGCCATAATGTACACATGGAACTATGGAGAAATGAAAAAACACCAATTTGATGTGGAAAACAAGGTCTCAATGAATAAGATGTTAGCCTTAGGACCTTGTTTAGGCATGGTCCGCGTCCCTGGAATCGGACTAATTTTCAGTAATCTTGTCTCCGGTATCCCTGCAATTTTTGGTCATTTTGTTACAAATTTACCGGCATTCCATCAGGTGTTGGTTTTTGTATGTGCTAAATCAGTTCAAGTCCCTTATGTCAGTGAAAATGAAAGATTGGTCGTTAGTAGGATCGGTCCGAAGGAGTACCACATGTTTCGTTGCATCGTCAGATATGGTTACAAAGATATGCAACAAGAGAACTACAATTTTGAGAATAAATTGGTATCTGCAATAATACTGTTTATAGAAATAGAAGAAAGTGTTCGAGAACAAACACAAGAATTAACTATAGATGATGGAAACATAAATGTGGAAGACCTTGATGCTTCACAACATACTTTGATGAATAGGTCATGTTGTGAAAAAAAATTCTTACCATTTTCATGTGATGGACAAAATCTTCATCAAGAGTCCTATAAAGTTGAGTCTTTGCAGATTTTAAAAGCCAAGGAGTCAGGTGTCACTTATATAGTTGGACATTCCTATGCAGAAGCAAAAAAATCATCTTCCATTCTAAAGAAATTTGGAATAGATTTTGTTTATGCTTTTCTAAGCAAAAATTGTAGAGATCCTGATATTATGTTGGAAGTAGCTCATACTTCTTTGCTAGAAGTTGGTATGGTTTATCATGTCTAA 2238 0.3369 MNPSEQFVEHGISQQNLKRTSCVNVLTLAYQSLGVVYGDLSTSPLYVYKTSFSGKLSLKEDDEEIFGVLSFIFWTFTIIALFKYVFIMMSADDNGEGGTFALYSLLCRHARLSILPNQQPTDENLSAYSTENSADTWQSSLLKLFFEKHPRFQKGLLIFVLLGTCMTIGDGVITPAISVFSAVSGVQVKINQLHDNYVVIVSCIILVGLFSIQHHGTHRVAFMFAPVVAAWLLCISGIGIYNIFRWNRQVYRALSPLYMLRLLKTTGIEGWLSLGGVVLSITGVETMYADMGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHYDIQRKAVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPHVKIVHTSRKIYGQIYIPEINWILMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTCLMTLVIIIVWKQGVIKALTCLLLFGSIELLYISASVCKVHEGGWIPILLSFFIMAIMYTWNYGEMKKHQFDVENKVSMNKMLALGPCLGMVRVPGIGLIFSNLVSGIPAIFGHFVTNLPAFHQVLVFVCAKSVQVPYVSENERLVVSRIGPKEYHMFRCIVRYGYKDMQQENYNFENKLVSAIILFIEIEESVREQTQELTIDDGNINVEDLDASQHTLMNRSCCEKKFLPFSCDGQNLHQESYKVESLQILKAKESGVTYIVGHSYAEAKKSSSILKKFGIDFVYAFLSKNCRDPDIMLEVAHTSLLEVGMVYHV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01577 745 TIGRFAM kup: potassium uptake protein 28 745 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car08g01577 745 Pfam K+ potassium transporter 30 596 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car08g01577 745 PANTHER POTASSIUM TRANSPORTER 7 622 - -
Car08g01577 745 PANTHER POTASSIUM TRANSPORTER 673 745 - -
Car08g01577 745 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 7 622 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car08g01577 745 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 673 745 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01577 Car-Chr8 25066466 25071802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01577 122 745 Inorganic Solute Cotransporters AT2G30070 64.818 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01577 K03549 - gmx:100798458 1265.37