Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01574 ATGGCGGACACAAATTCGGTTGAAGTGATTTTGGACTTTTTGAGGAGGAACCGGTTTACACGAGCTGAGGCAGCTTTGCGAAGTGAGCTCAATAACTGTTCTGATGTAAACGGGTTCCTTCAGAAGCTTACATTGGAAGAAAAGAACTTGTGTGATTTGCCGCAGAATGATAAGGGGAAGCTAGTGGTAGAAAATCGAGGGTTGGATTCTCGTCGTGATAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATTGAGTGTGGTACCGGTAGAAATACTACTACTGAGAACAAATGGAAAAATGCTACTCCAGCTGAGGAAAGGAATAAATCTAATGAAGTGGTTGGAACGAGTGGCACAAATTTCACTTTCTTGAAGAGTTCAGAGGACAGCGTGTTTGATTTACACTCATGGAAGATCAATGGTCCTAGTGAGCCATACCAAAATGATGGTGGAAGCAAGGCTAATAATACTCTGAAGGCTTCACTATCTCAGCAAGCGAAAAATCAAACAAGTGAAGCCTTTGATGCAGCCAACAGTAATGCAAAAACTGGGGAGGAAAGTAATGTGCCTGCCGAGAAAAAACCCTCGTGGACTGGAAGTAGTGGTAAAGCCTCGACGGAACCAAAGTTTAACCTTATGCAAAACAAAGAGTCTAGGGAAATTGATCGGCAGCAACTTAAGTTTAATAGTTCATCACATAAAGAGAATTTGGCAGATAATGTCTTGTCAAGAGCTGACGAGAATGCGAATTCATCTTCCGACGTATGGAAAGATTGTTCCATCAAGACTGTTTTCCCTTTCTCAAAGGGGGATGTGTCTACGTCTACGAGCTACAGCGGTTCAACTTATTCGGAAAAAATAGATGAAAAGAGAAAGCCAGAAATCAGTGATGCGAGGGCTTATATAAAAGAGCAGGTGGATGAAGTCGGGAGAGCTTTTTACTTGGGGAAGTTGCAAGGAAGTTCGGAACCGAATAATATTGATGGCTTAAGTTTTCCTCTTGCACCGGAGAAGCAGAAGGAAGAGTATCCAAGGCTTCCTCCTGTAAAAATTAAGTCAGAAGATAAGCCCTTGACTATTAATTGGGGCGAGAAGTTTGACTCCGATGGATTGGCTGCAAAGCTCGCAAGTGCTGACAGCACTTTACTTATTGGATCATATCTTGATGTCCCTATTGGACAAGAAATCAAAACCGCAGGTATGAGGAAGGCTACAGGAGGTAGTTGGCTGTCCGTAAGTCAAGGAATATCGGAGGATACCTCTGATCTTGTATCTGGTTTTGCTACAGTTGGTGATGGGTTGAGCGAATCTGTTGATTACCCAAATGAATATTGGGACTCTGATGAATATGACGACGACGACGATGTTGGATACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTAGCTCACGAAATCGATTACCCTAGTGACAATGAAAAAGGGACCGGGCATGGAAGTGTTCCTGATCCTCAAGAAAGAGGTCCTTCCAAAGATGAGGATGATGATCAATCTTTTGCCGAGGAGGATTCTTACTTCTCTGGGGAGCAATATCTTCAAGCAAAAAATGTTGAGCCGGTCATAGCTTTGGACGATCCTATCGGTATAACGGTTACTAATATGTACGGAAGGGCTAATGGTAATGATTTAATGGCTCAATATGATGGAGAATTGATGGATGTAGAAGAACTGAATCTGATGCATGCAGAACCTGTTTGGCAGGGCTTTGTCCCTCAGACAAATGATCTAATCATGCTGGGAGATGGGAAGGTTCTGAATCATAGTGGAAGATCACGACTTGAGGAAATCGAAGACGATCAACACGGTTCTGTTAGGTCAATCGGGGTGGGGATCAACAGTGATACTGCTGATATTGGCAGTGAAGTGCATGGTAGTGAAGGGGATTTAGAATATTTCCGTGATCGTGATAGTGTGTTTGGGGGATCCAAACATTCTCATCGTGATTTCATTAAGTCTTCTATGGACAAATCGTTCAAAAACAAGAAGAAAAATGACGAGATCGAGTCGAATAAATATGTCATTGGGGGTCATAAAGATGCACACTCGCAAATAAAAACGCATACCGATGTCAACTTTTCATTTCCTCAATCTCTTAAAGACAGCCAGATGATTCAGGGTGGGTCCAGTAAGTCGCCATGGTCAAATAATTGCAACGCTGACGAAACCGATGAATGTATTAATGCTTTTGTGGGATCTGATGAAATGCTTTCCTCTTGGAGGCAGAAGAGTAGTGATTCTTCGCCCGATAAAAGTTCTAGGGATGATAATAATGCTAATGCGATTAGATCCTCAAACTCTTCCCCAACTACGGTCTCAAATTATGGGTATGCTGATAAAGGGGATGTCAAGCTAGAAAAGGAAGAAGAAGAGGTTGACATTACAAGGGACGATGATTTAGGTGTATCACAAGAGGATGAAGAGATCGCTGCGGTGCAAGAGCAGGTAAGGCAAATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGTAAAGCTATACAAGCGCATGACCTGCACACAGGTGTAGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAGATCAAACTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTGCGGTTATATGATTATTTCTATTATAGAGAACATTTGTTGATAGTATGTGAACTACTCAAAGCCAACTTATACGAGTTTCATAAATTTAACAGAGAATCAGGAGGGGAAGTTTACTTCACAATGCCAAGATTGCAGTCTATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATGGCCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTCGAGACAGATCACCTTTGCTCGTATGTTCAGTCAAGGTCCTATCGTGCTCCCGAGGTTATTATGGGGCTTTCATATGACAAGAAGATTGATATTTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACCGGAAATGTCTTATTCCAAAACGATTCTCCAGCGACATTACTAGCCCGGGTAATTGGAATCATCGGTCCAATTGATCAAAGTATGCTAGCGAAAGGACGGGATACATATAAGTACTTCACAAAAAATCACATGCTTTATGAGAGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACATCCTTGAGGCATAGATTACCAATGGGGGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGGTTAACCCGAAGAAGCGGCCTTCTGCATCCGAGGCTCTAAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTAA 3543 0.416 MADTNSVEVILDFLRRNRFTRAEAALRSELNNCSDVNGFLQKLTLEEKNLCDLPQNDKGKLVVENRGLDSRRDSVEVSKELIVKEIECGTGRNTTTENKWKNATPAEERNKSNEVVGTSGTNFTFLKSSEDSVFDLHSWKINGPSEPYQNDGGSKANNTLKASLSQQAKNQTSEAFDAANSNAKTGEESNVPAEKKPSWTGSSGKASTEPKFNLMQNKESREIDRQQLKFNSSSHKENLADNVLSRADENANSSSDVWKDCSIKTVFPFSKGDVSTSTSYSGSTYSEKIDEKRKPEISDARAYIKEQVDEVGRAFYLGKLQGSSEPNNIDGLSFPLAPEKQKEEYPRLPPVKIKSEDKPLTINWGEKFDSDGLAAKLASADSTLLIGSYLDVPIGQEIKTAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPSKDEDDDQSFAEEDSYFSGEQYLQAKNVEPVIALDDPIGITVTNMYGRANGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMLGDGKVLNHSGRSRLEEIEDDQHGSVRSIGVGINSDTADIGSEVHGSEGDLEYFRDRDSVFGGSKHSHRDFIKSSMDKSFKNKKKNDEIESNKYVIGGHKDAHSQIKTHTDVNFSFPQSLKDSQMIQGGSSKSPWSNNCNADETDECINAFVGSDEMLSSWRQKSSDSSPDKSSRDDNNANAIRSSNSSPTTVSNYGYADKGDVKLEKEEEEVDITRDDDLGVSQEDEEIAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIMGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01574 1180 MobiDBLite consensus disorder prediction 163 220 - -
Car08g01574 1180 CDD PKc_DYRK_like 869 1171 - -
Car08g01574 1180 SMART serkin_6 869 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01574 1180 SUPERFAMILY Protein kinase-like (PK-like) 858 1173 IPR011009 -
Car08g01574 1180 MobiDBLite consensus disorder prediction 163 188 - -
Car08g01574 1180 PANTHER - 2 1178 - -
Car08g01574 1180 MobiDBLite consensus disorder prediction 94 118 - -
Car08g01574 1180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Car08g01574 1180 MobiDBLite consensus disorder prediction 481 511 - -
Car08g01574 1180 ProSiteProfiles Protein kinase domain profile. 869 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01574 1180 Gene3D Transferase(Phosphotransferase) domain 1 923 1171 - -
Car08g01574 1180 MobiDBLite consensus disorder prediction 746 802 - -
Car08g01574 1180 MobiDBLite consensus disorder prediction 767 784 - -
Car08g01574 1180 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1178 - -
Car08g01574 1180 Gene3D Phosphorylase Kinase; domain 1 863 950 - -
Car08g01574 1180 MobiDBLite consensus disorder prediction 195 214 - -
Car08g01574 1180 Coils Coil 811 841 - -
Car08g01574 1180 Pfam Protein kinase domain 869 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01574 Car-Chr8 24957612 24966847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01574 868 1166 MAP Kinase Gene Family AT5G19010 31.975 1.21e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Car08g01574 Pkinase 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01574 - - gmx:100786225 1922.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01574 08 24957612 24966847 Car08g01574 08 24957612 24966847 ECH