Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01568 aTGAATGCTATAACGAAGAAAAAAGTTCAGAAGAAGTGCAAAATCAGAGGCTACAATATCAAACCCGAAGCTCTCGACGAAATCCTCTCCTTCGTTTCTCGCTTTGAACGCTCCGAAGAAGACGAAGCCATCGATCTCGTCCTCGATCAACTAGAACACGAATCTCTGAAATCTGCAATAATCGACGTAGAGCCAGTGCAACGAGTGGTGAACTTGCTATTGGAAGCCGACGCGGCGGAGGAAACTTTTGATACATTCGCTTCTTCTTCTTCTTCCGCCATTGGTGTTATTGACGTGTTCCTTGTTCCCAAGTATAAATACGACGCTATTAGAAGGATATTCTACCAGCACACAGGAAGCTTACCTATTCATGGGGATGCACCAGCAAAAACTGCTCTGTACAGAGATATGTTTCTGTTGTTGTCCCAGAGGATTTCTCGTCACCAGGATTTTTCGAGGCCAGCTTTTGAGTCCGAACTTTCACAATTCCGGAGTTGTGAGATATCTCCTATTCAATCACTGGTTGGGCAAAAAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACATTTTTATTTGGAAGACCTTACTGCTTCTGTTGAAATCAATTTATCTGATGCTAATATAACTACAGGACTCTTCATAGAGAACACCATAGTTGTGGCTGAAGGCGAGATGCTTGTAGAGGGTATTTTTAAGATTTTAACATGTGGGTTTCCACCATTAGAAGATAGAGATAAATCACTTCAAGTGGTTGCAGGGCAAGACTTTTTCGGTGGTGGTACTTTTACAAAAGAGGAAACGATCAGACTGGCAGAGATGGAGAAAAGAGCAGTCAATGACATGTTTGTCATACTATCTGAAATTTGGCTAGACAAGGAAGAGGCTTTGGGAAAGCTAGAGATTGTTCTTGATGGTTTTGAGAGTGTAGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAAACCATGTAACCTTGCAAATTCCGATTATTCGAGCCTAAGGTTGCAGTTTGGCAAGCTAGGGCAAATTATTGCTGCCCGTCCACGGCTAAAAGAGAACAGCCGATTTCTTTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAACAGCTCTTCCTAGGTGTGCTCTACCTAAATATTTAACTGAGGAGCTTCAAAAGTATATTCCCGAAGCCATATTTTCAAGCAATCCCTGCAGGGTAAAATTCTATACCCAAGAAGTTGTATTTTTCCGCCAGGATCTGCTGTATAGAATGCGTCGTTCTTGTTTAATGCCGCCTTCTGTGACAGAAACTGCAGATCCTTTTCAGCATTTTGTTGCCACCATAACCCATCAGAGTCATCTCTGTCCACTCCCTCTAACTGTACAACCCATCATATGGAATTATGACCATTGCCTTCATTTGTATCCAACTCCGCACACGATAGTTTTAGGAGACAGAAGTCCGCAGAAGGCTTTCAAGTACACAGGAATCACTTGTTTTAATACCGGATCTTTCTCCGAGGATAGCACATTTGTTGCATACCGCCCTTGCTCTCAGGAAGTTGAATTGTCATCCTTGTGA 1590 0.4258 MNAITKKKVQKKCKIRGYNIKPEALDEILSFVSRFERSEEDEAIDLVLDQLEHESLKSAIIDVEPVQRVVNLLLEADAAEETFDTFASSSSSAIGVIDVFLVPKYKYDAIRRIFYQHTGSLPIHGDAPAKTALYRDMFLLLSQRISRHQDFSRPAFESELSQFRSCEISPIQSLVGQKGRRWVMGVISQLEDGHFYLEDLTASVEINLSDANITTGLFIENTIVVAEGEMLVEGIFKILTCGFPPLEDRDKSLQVVAGQDFFGGGTFTKEETIRLAEMEKRAVNDMFVILSEIWLDKEEALGKLEIVLDGFESVEVVPSLFVFMGNFCSKPCNLANSDYSSLRLQFGKLGQIIAARPRLKENSRFLFIPGPDDAGPSTALPRCALPKYLTEELQKYIPEAIFSSNPCRVKFYTQEVVFFRQDLLYRMRRSCLMPPSVTETADPFQHFVATITHQSHLCPLPLTVQPIIWNYDHCLHLYPTPHTIVLGDRSPQKAFKYTGITCFNTGSFSEDSTFVAYRPCSQEVELSSL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01568 529 Gene3D - 3 72 - -
Car08g01568 529 PIRSF DNA_pol_epsilon_2 1 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Car08g01568 529 Pfam DNA polymerase alpha/epsilon subunit B 287 492 IPR007185 GO:0003677|GO:0006260
Car08g01568 529 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 7 528 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01568 Car-Chr8 24904438 24909649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01568 16 498 Core DNA Replication Machinery Family AT5G22110 67.909 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01568 K02325 - jre:109012089 844.728