Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01566 ATGTTCATGTTTGAGAGAGATCACAGAGAGTTTGAGGATTTTGGTGAAACTACAAAGGACATTTTTTTGTCAAAATTATGGTTCAAGATGCCAGAGAGTTCTATACCAAAGGATGCAGCATATCAAATAATAAATGATGAGTTGATGTTAGATGGTAAGCCAAGGCTTAACTTGGCTTCATTTGTGACAACTTGGATGGAGCCTGAGTGTGATAAGCTTATCATGGCTTCACTCAACAAGAACTATGTTGACATGGATGAGTACCCTGTCACTACTGAGCTTCAGAACCGGTGTGTGAATATAATAGCACATCTATTCAATGCTCCTATTGGTGCAGAGGAAACTGCAGTAGGTGTGGGGACCGTTGGTTCATCAGAGGCAATAATGTTAGCTGGTTTAGCTTTCAAAAGAAAATGGCAGACTAAGAGAAAATTAGAAGGCAAACCATATGATAAGCCTAACATAGTTACTGGTGCTAATGTGCAGGTTTGTTGGGAAAAGTTTGCTAGATACTTTGAAGTTGAACTAAAGGAAGTGAAACTAAGAGAGGGATACTATGTGATGGACCCATTGAAAGCAGTTGAAATGGTAGATGAGAACACCATATGTGTTGCAGCCATTTTAGGGTCAACGCTAACCGGAGAGTTTGAGGATGTGAAGCTTCTTCACGAACTTCTTACTAAAAAGAACAAGGAGACAGGATTCGATACTCCAATTCATGTCGACGCTGCGAGTGGCGGTTTTGTTGCTCCGTTTCTCTACCCTGATCTAGAATGGGATTTTCGTTTGCCGTTGGTGAAGAGCATCAATGTTAGTGGTCACAAGTATGGTCTTGTTTATCCCGGTGTTGGTTGGGTTGTCTGGAGGAGTAAAGAGGACTTGCCGGATGATCTTGTTTTCCATATCAATTATCTTGGATCTGATCAGCCAACTTTCACATTGAATTTCTCCAAAGGATCGAGTCAAATCATTGCTCAATACTACCAATTCATACGCCTTGGCTTCGAGGGCTACAAAAATGTAATGGAAAATTGCTTGGAGAATACAATAGTTTTGAAGAAAGGAATTGAGAAAACAGGAAGGTTCAACATTCTCTCCAAAGATGTAGGAGTGCCACTTGTAGCCTTCACATTGAAAGACAGTAGCCATCACACCGTGTTCGAGATAGCCGACCATTTAAGAAAATATGGTTGGATAGTTCCGGCCTATACAATGCCGGCAGACGCTCAACACATCGCCGTCCTCCGAGTTGTGATTAGGGAGGATTTCAGCTGTAGCTTGGCTGAGAGACTTGTGTCTGACATAGACAAAGTTGTTAAACACTTGGACACACTTCCAAGCACTGTCTCCATTAAAAGTGCTCATGTCACAGCTAGTACTAGTGAGGATAGTGAGAAAGTTAAGAAAGATGTTAAAGAGAGTCATGATGCGATTACAAAGTATTGGAAGAAGCTTGTGGATGGAAAGACAGTTGGAACATGCTAG 1485 0.4141 MFMFERDHREFEDFGETTKDIFLSKLWFKMPESSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGAEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKLEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLHELLTKKNKETGFDTPIHVDAASGGFVAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKEDLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCLENTIVLKKGIEKTGRFNILSKDVGVPLVAFTLKDSSHHTVFEIADHLRKYGWIVPAYTMPADAQHIAVLRVVIREDFSCSLAERLVSDIDKVVKHLDTLPSTVSIKSAHVTASTSEDSEKVKKDVKESHDAITKYWKKLVDGKTVGTC 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01566 494 Gene3D - 359 446 - -
Car08g01566 494 Gene3D - 23 63 - -
Car08g01566 494 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 25 442 IPR010107 GO:0004351|GO:0006536|GO:0030170
Car08g01566 494 CDD DOPA_deC_like 57 437 - -
Car08g01566 494 PANTHER GLUTAMATE DECARBOXYLASE 26 494 - -
Car08g01566 494 Gene3D - 64 358 IPR015421 GO:0003824
Car08g01566 494 PANTHER GLUTAMATE DECARBOXYLASE 26 494 IPR010107 GO:0004351|GO:0006536|GO:0030170
Car08g01566 494 Pfam Pyridoxal-dependent decarboxylase conserved domain 31 379 IPR002129 GO:0016830|GO:0019752|GO:0030170
Car08g01566 494 SUPERFAMILY PLP-dependent transferases 16 442 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01566 Car-Chr8 24892994 24898541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01566 28 494 Calmodulin-binding Proteins AT5G17330 78.903 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01566 K01580 - gmx:100796475 829.706