Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01549 ATGGCTGATGCTCATGATACTGATAAGAACATTGAGGTGTGGAAAATCAAGAAATTGATCAAGGCTCTTGAAGCTGCCAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCCCCACGTGATCAAATTGCTCGTGTTACCAAGATGCTTGGAGATGAGTTTGGAACTGCTTCAAATATCAAAAGTAGGGTGAATCGGCAGTCTGTGCTTGGTGCTATCACTTCTGCTCAGCAGAGGCTAAAGCTTTATAACAAGGTTCCTCCAAATGGGCTTGTTTTGTATACTGGCACAATTGTGACTGATGATGGGAAGGAGAAAAAGGTGACCATTGATTTTGAACCATTTAGACCTATCAATGCGTCTCTCTATCTTTGTGACAACAAGTTTCACACTGAAGCTCTAAACGAGCTCCTGGAATCTGATGACAAGTTTGGATTTATTGTCATGGATGGAAATGGCACTCTGTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCACAAGTTCAGTGTGGATCTCCCAAAGAAACATGGAAGAGGTGGGCAATCAGCCCTGCGGTTTGCCCGTCTTCGCATGGAGAAGCGTCATAATTATGTGAGGAAAACTGCCGAGCTTGCAACCCAGTTTTATATCAATCCTGCTACCAGTCAGCCTAATGTTTCTGGATTAATACTTGCTGGTTCTGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCCCGTCTTCAGGCGAAGATACTTAATGTTGTAGATGTCTCTTATGGAGGGGAGAATGGGTTTAATCAGGCTATCGAACTATCTTCTGAAATTCTGTCCAATGTAAAGTTTATTCAGGAGAAACGCTTGATTGGAAAATATTTTGAGGAAATCAGTCAGGATACAGGGAAATATGTCTTTGGTGTTGATGATACTCTACAAGCTCTGGATGCAGGAGCTGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGTCTAGGTATGTCTTAAAAAATAGTACTACTGGTGAGGTCGTCATTAAGCACTTCAACAAGGAGCAGGAAGCCAACCAGAGTAATTTTAGAGATCCTGAAAGTTCTGCTGATTATGAAGTTCAAGAAAAGCTGTCTCTGTTGGAGTGGTTTGCAAATGAATATAGACGGTTTGGTTGCACTCTCGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTTGGTGGGATAGGTGGGATCTTGCGTTACCAGCTTGATATGAGGACATTTGATGAGTTTTCTGATGATGGAGGCGAAAGGGAGGCCAAAATGCTTGCACCAGTATGGGAGGTGgctgcacgtgctgctgctgctgctgctcctcctcctctgcctcctcgtccGTCTGCGGTGTTGTTGCATGAAAAGTTTGATTGCGAATTGAGCTGCTTGTCCCCAAATGAGCTGTCTGCTGTGAGTTACAACCTCACTTGCTCTCATATTGTTCAATCTCTGGCACTACAAATTTCAGCAACATTGCTGGCAACAACGGGTGAAAATCTGTCATATCCCTGTACGTTTAGATCTATTGTTATAGTGTTATTCCTTATTCTTGTCCCTAGAATATCTCTCATGCTTCCCAAAGAAGACAACCTAGCATCAATGAAGTCTTTATTGAACCTGTCTGTCTATGAAATTGAAACCTTACAAAGTTTTGATGAAGACGCAGGTGAATTGAGATTTTTCTTCGAATGTTTTTCTTCAAGGATAATAAAAGCCAATATTTGA 1767 0.4018 MADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLQALDAGAVETLIVWENLDMSRYVLKNSTTGEVVIKHFNKEQEANQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDEFSDDGGEREAKMLAPVWEVAARAAAAAAPPPLPPRPSAVLLHEKFDCELSCLSPNELSAVSYNLTCSHIVQSLALQISATLLATTGENLSYPCTFRSIVIVLFLILVPRISLMLPKEDNLASMKSLLNLSVYEIETLQSFDEDAGELRFFFECFSSRIIKANI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01549 588 SMART eRF1_1_2 4 140 IPR005140 -
Car08g01549 588 Gene3D eRF1 domain 2 136 277 IPR042226 -
Car08g01549 588 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 13 417 IPR004403 GO:0003747|GO:0006415
Car08g01549 588 Pfam eRF1 domain 1 18 138 IPR005140 -
Car08g01549 588 Pfam eRF1 domain 2 144 277 IPR005141 -
Car08g01549 588 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Car08g01549 588 Gene3D eRF1 domain 1 2 135 IPR024049 -
Car08g01549 588 Pfam eRF1 domain 3 281 418 IPR005142 -
Car08g01549 588 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 432 IPR004403 GO:0003747|GO:0006415
Car08g01549 588 SUPERFAMILY Translational machinery components 142 276 - -
Car08g01549 588 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 432 - -
Car08g01549 588 SUPERFAMILY L30e-like 278 420 IPR029064 -
Car08g01549 588 Gene3D - 279 434 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01549 Car-Chr8 24591376 24594305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01549 1 428 Eukaryotic Initiation Factors Gene Family AT3G26618 90.187 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01549 K03265 - gmx:100785916 822.002